Zakharia M Frenkel
Zakharia M Frenkel
Verified email at braude.ac.il - Homepage
Title
Cited by
Cited by
Year
Nucleosome positioning pattern derived from oligonucleotide compositions of genomic sequences
AE Rapoport, ZM Frenkel, EN Trifonov
Journal of Biomolecular Structure and Dynamics 28 (4), 567-574, 2011
452011
Evolution of protein modularity
EN Trifonov, ZM Frenkel
Current opinion in structural biology 19 (3), 335-340, 2009
452009
Nucleosome DNA sequence structure of isochores
ZM Frenkel, T Bettecken, EN Trifonov
BMC genomics 12 (1), 1-6, 2011
272011
Human nucleosomes: special role of CG dinucleotides and Alu-nucleosomes
T Bettecken, ZM Frenkel, EN Trifonov
Bmc Genomics 12 (1), 1-5, 2011
262011
Origin and evolution of genes and genomes. Crucial role of triplet expansions
ZM Frenkel, EN Trifonov
Journal of Biomolecular Structure and Dynamics 30 (2), 201-210, 2012
222012
Walking through protein sequence space
ZM Frenkel, EN Trifonov
Journal of theoretical biology 244 (1), 77-80, 2007
222007
Combinations of ancestral modules in proteins
Y Sobolevsky, ZM Frenkel, EN Trifonov
Journal of molecular evolution 65 (6), 640-650, 2007
202007
Walking through the protein sequence space: Towards new generation of the homology modeling
ZM Frenkel, EN Trifonov
PROTEINS: Structure, Function, and Bioinformatics 67 (2), 271-284, 2007
192007
From protein sequence space to elementary protein modules
ZM Frenkel, EN Trifonov
Gene 408 (1-2), 64-71, 2008
162008
Multiple levels of meaning in DNA sequences, and one more
EN Trifonov, Z Volkovich, ZM Frenkel
Annals of the New York Academy of Sciences 1267 (1), 35-38, 2012
142012
Evolutionary networks in the formatted protein sequence space
ZM Frenkel, EN Trifonov
Journal of Computational Biology 14 (8), 1044-1057, 2007
142007
Closed loops of TIM barrel protein fold
ZM Frenkel, EN Trifonov
Journal of Biomolecular Structure and Dynamics 22 (6), 643-655, 2005
112005
Molecular dynamics of protein folding
ZM Frenkel, AI Melker
Sixth International Workshop on Nondestructive Testing and Computer …, 2003
102003
Does Protein Relatedness Require Sequence Matching? Alignment via Networks in Sequence Space
ZM Frenkel
Journal of Biomolecular Structure and Dynamics 26 (2), 215-222, 2008
72008
Nucleosome positioning patterns derived from human apoptotic nucleosomes
ZM Frenkel, EN Trifonov, Z Volkovich, T Bettecken
Journal of Biomolecular Structure and Dynamics 29 (3), 577-583, 2011
62011
Types of polypeptide self-organization: molecular dynamics simulations
AI Melker, ZM Frenkel
Fourth International Workshop on Nondestructive Testing and Computer …, 2001
62001
Apoptotic cleavage of DNA in human lymphocyte chromatin shows high sequence specificity
T Bettecken, ZM Frenkel, J Altmüller, P Nürnberg, EN Trifonov
Journal of Biomolecular Structure and Dynamics 30 (2), 211-216, 2012
42012
Structural relatedness via flow networks in protein sequence space
ZM Frenkel, ZM Frenkel, EN Trifonov, S Snir
Journal of theoretical biology 260 (3), 438-444, 2009
42009
Hidden ancient repeats in DNA: Mapping and quantification
ZM Frenkel, Z Barzily, Z Volkovich, EN Trifonov
Gene 528 (2), 282-287, 2013
32013
Detecting Non-Uniform Clusters in Large-Scale Interaction Graphs
N Levtov, S Amberkar, ZM Frenkel, L Kaderali, Z Volkovich
Journal of Computational Biology 21 (2), 173-183, 2014
22014
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Articles 1–20