| In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features Y Ding, Y Tang, CK Kwok, Y Zhang, PC Bevilacqua, SM Assmann Nature 505 (7485), 696-700, 2014 | 811 | 2014 |
| Abscisic Acid Coordinates Nod Factor and Cytokinin Signaling during the Regulation of Nodulation in Medicago truncatula Y Ding, P Kalo, C Yendrek, J Sun, Y Liang, JF Marsh, JM Harris, ... The Plant Cell 20 (10), 2681-2695, 2008 | 235 | 2008 |
| The NIN Transcription Factor Coordinates Diverse Nodulation Programs in Different Tissues of the Medicago truncatula Root T Vernié, J Kim, L Frances, Y Ding, J Sun, D Guan, A Niebel, ML Gifford, ... The Plant Cell 27 (12), 3410-3424, 2015 | 187 | 2015 |
| Determination of in vivo RNA structure in low-abundance transcripts CK Kwok, Y Ding, Y Tang, SM Assmann, PC Bevilacqua Nature communications 4 (1), 2971, 2013 | 130 | 2013 |
| Positioning the nodule, the hormone dictum Y Ding, GED Oldroyd Plant Signaling & Behavior 4 (2), 89-93, 2009 | 123 | 2009 |
| G-quadruplex structures trigger RNA phase separation Y Zhang, M Yang, S Duncan, X Yang, MAS Abdelhamid, L Huang, ... Nucleic acids research 47 (22), 11746-11754, 2019 | 108 | 2019 |
| Genome-wide profiling of in vivo RNA structure at single-nucleotide resolution using structure-seq Y Ding, CK Kwok, Y Tang, PC Bevilacqua, SM Assmann Nature protocols 10 (7), 1050-1066, 2015 | 99 | 2015 |
| RNA G-quadruplex structures exist and function in vivo in plants X Yang, J Cheema, Y Zhang, H Deng, S Duncan, MI Umar, J Zhao, Q Liu, ... Genome biology 21, 1-23, 2020 | 78 | 2020 |
| A stable RNA G-quadruplex within the 5′-UTR of Arabidopsis thaliana ATR mRNA inhibits translation CK Kwok, Y Ding, S Shahid, SM Assmann, PC Bevilacqua Biochemical Journal 467 (1), 91-102, 2015 | 77 | 2015 |
| VERNALIZATION1 controls developmental responses of winter wheat under high ambient temperatures LE Dixon, I Karsai, T Kiss, NM Adamski, Z Liu, Y Ding, V Allard, SA Boden, ... Development 146 (3), dev172684, 2019 | 68 | 2019 |
| StructureFold: genome-wide RNA secondary structure mapping and reconstruction in vivo Y Tang, E Bouvier, CK Kwok, Y Ding, A Nekrutenko, PC Bevilacqua, ... Bioinformatics 31 (16), 2668-2675, 2015 | 56 | 2015 |
| Rice in vivo RNA structurome reveals RNA secondary structure conservation and divergence in plants H Deng, J Cheema, H Zhang, H Woolfenden, M Norris, Z Liu, Q Liu, ... Molecular plant 11 (4), 607-622, 2018 | 54 | 2018 |
| A hybridization-based approach for quantitative and low-bias single-stranded DNA ligation CK Kwok, Y Ding, ME Sherlock, SM Assmann, PC Bevilacqua Analytical biochemistry 435 (2), 181-186, 2013 | 53 | 2013 |
| In vivo single-molecule analysis reveals COOLAIR RNA structural diversity M Yang, P Zhu, J Cheema, R Bloomer, P Mikulski, Q Liu, Y Zhang, ... Nature 609 (7926), 394-399, 2022 | 50 | 2022 |
| Targeting the conserved stem loop 2 motif in the SARS-CoV-2 genome V Lulla, MP Wandel, KJ Bandyra, R Ulferts, M Wu, T Dendooven, X Yang, ... Journal of virology 95 (14), 10.1128/jvi. 00663-21, 2021 | 43 | 2021 |
| Structure of the three-way helical junction of the hepatitis C virus IRES element J Ouellet, S Melcher, A Iqbal, Y Ding, DMJ Lilley RNA 16 (8), 1597-1609, 2010 | 40 | 2010 |
| Intact RNA structurome reveals mRNA structure-mediated regulation of miRNA cleavage in vivo M Yang, HC Woolfenden, Y Zhang, X Fang, Q Liu, ML Vigh, J Cheema, ... Nucleic Acids Research 48 (15), 8767-8781, 2020 | 33 | 2020 |
| New era of studying RNA secondary structure and its influence on gene regulation in plants X Yang, M Yang, H Deng, Y Ding Frontiers in plant science 9, 368037, 2018 | 32 | 2018 |
| Copper ion elicits defense response in Arabidopsis thaliana by activating salicylate-and ethylene-dependent signaling pathways H Liu, B Zhang, T Wu, Y Ding, X Ding, Z Chu Molecular plant 8 (10), 1550-1553, 2015 | 32 | 2015 |
| In vivo nuclear RNA structurome reveals RNA-structure regulation of mRNA processing in plants Z Liu, Q Liu, X Yang, Y Zhang, M Norris, X Chen, J Cheema, H Zhang, ... Genome Biology 22, 1-22, 2021 | 26 | 2021 |
Chun Kit KwokAssociate Professor, Department of Chemistry, City University of Hong KongVerified email at cityu.edu.hk
