Andrey A Shabalin
Andrey A Shabalin
Research Assistant Professor, Department of Psychiatry, University of Utah
Verified email at utah.edu - Homepage
Title
Cited by
Cited by
Year
The genotype-tissue expression (GTEx) project
J Lonsdale, J Thomas, M Salvatore, R Phillips, E Lo, S Shad, R Hasz, ...
Nature genetics 45 (6), 580-585, 2013
34882013
The Genotype-Tissue Expression (GTEx) pilot analysis: Multitissue gene regulation in humans
GTEx Consortium
Science 348 (6235), 648-660, 2015
26542015
Genetic effects on gene expression across human tissues
GTE Consortium, DACCL Lead analysts: Laboratory, NIH management, ...
Nature 550, 204-213, 2017
13882017
An integrated map of structural variation in 2,504 human genomes
PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ...
Nature 526 (7571), 75-81, 2015
12912015
Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
AA Shabalin
Bioinformatics 28 (10), 1353-1358, 2012
8982012
Heritability and genomics of gene expression in peripheral blood
FA Wright, PF Sullivan, AI Brooks, F Zou, W Sun, K Xia, V Madar, ...
Nature genetics 46 (5), 430-437, 2014
2972014
Merging two gene-expression studies via cross-platform normalization
AA Shabalin, H Tjelmeland, C Fan, CM Perou, AB Nobel
Bioinformatics 24 (9), 1154-1160, 2008
2232008
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249-254, 2017
2162017
Finding large average submatrices in high dimensional data
AA Shabalin, VJ Weigman, CM Perou, AB Nobel
The Annals of Applied Statistics 3 (3), 985-1012, 2009
1502009
seeQTL: A searchable database for human eQTLs
K Xia, AA Shabalin, S Huang, V Madar, YH Zhou, W Wang, F Zou, W Sun, ...
Bioinformatics 28 (3), 451-452, 2011
1192011
Quantitative trait locus mapping methods for diversity outbred mice
DM Gatti, KL Svenson, A Shabalin, LY Wu, W Valdar, P Simecek, ...
G3: Genes, Genomes, Genetics 4 (9), 1623-1633, 2014
1182014
Reconstruction of a Low-rank Matrix in the Presence of Gaussian Noise
A Shabalin, A Nobel
Journal of Multivariate Analysis 118, 67-76, 2013
1182013
Basal-like Breast cancer DNA copy number losses identify genes involved in genomic instability, response to therapy, and patient survival
VJ Weigman, HH Chao, AA Shabalin, X He, JS Parker, SH Nordgard, ...
Breast cancer research and treatment 133 (3), 865-880, 2012
1142012
High density methylation QTL analysis in human blood via next-generation sequencing of the methylated genomic DNA fraction
JL McClay, AA Shabalin, MG Dozmorov, DE Adkins, G Kumar, S Nerella, ...
Genome biology 16 (1), 1-16, 2015
932015
Co-expression networks reveal the tissue-specific regulation of transcription and splicing
A Saha, Y Kim, ADH Gewirtz, B Jo, C Gao, IC McDowell, BE Engelhardt, ...
Genome research 27 (11), 1843-1858, 2017
842017
The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency
CR Lickwar, B Rao, AA Shabalin, AB Nobel, BD Strahl, JD Lieb
PloS one 4 (3), e4886, 2009
712009
Epigenetic aging in major depressive disorder
LKM Han, M Aghajani, SL Clark, RF Chan, MW Hattab, AA Shabalin, ...
American Journal of Psychiatry 175 (8), 774-782, 2018
642018
FastMap: fast eQTL mapping in homozygous populations
DM Gatti, AA Shabalin, TC Lam, FA Wright, I Rusyn, AB Nobel
Bioinformatics 25 (4), 482-489, 2009
502009
Resolving the polymorphism-in-probe problem is critical for correct interpretation of expression QTL studies
A Ramasamy, D Trabzuni, JR Gibbs, A Dillman, DG Hernandez, ...
Nucleic acids research 41 (7), e88-e88, 2013
432013
An empirical Bayes approach for multiple tissue eQTL analysis
G Li, AA Shabalin, I Rusyn, FA Wright, AB Nobel
Biostatistics, kxx048, 2017
40*2017
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