| OSPREY 3.0: Open‐source protein redesign for you, with powerful new features MA Hallen, JW Martin, A Ojewole, JD Jou, AU Lowegard, MS Frenkel, ... Journal of computational chemistry 39 (30), 2494-2507, 2018 | 70 | 2018 |
| Structure of an HIV-1–neutralizing antibody target, the lipid-bound gp41 envelope membrane proximal region trimer PN Reardon, H Sage, SM Dennison, JW Martin, BR Donald, SM Alam, ... Proceedings of the National Academy of Sciences 111 (4), 1391-1396, 2014 | 63 | 2014 |
| Automated NMR assignment and protein structure determination using sparse dipolar coupling constraints BR Donald, J Martin Progress in nuclear magnetic resonance spectroscopy 55 (2), 101, 2009 | 49 | 2009 |
| nextPYP: a comprehensive and scalable platform for characterizing protein variability in situ using single-particle cryo-electron tomography HF Liu, Y Zhou, Q Huang, J Piland, W Jin, J Mandel, X Du, J Martin, ... Nature Methods 20 (12), 1909-1919, 2023 | 19 | 2023 |
| Continuous interdomain orientation distributions reveal components of binding thermodynamics Y Qi, JW Martin, AW Barb, F Thélot, AK Yan, BR Donald, TG Oas Journal of molecular biology 430 (18), 3412-3426, 2018 | 13 | 2018 |
| A geometric arrangement algorithm for structure determination of symmetric protein homo-oligomers from NOEs and RDCs JW Martin, AK Yan, C Bailey-Kellogg, P Zhou, BR Donald Journal of Computational Biology 18 (11), 1507-1523, 2011 | 13 | 2011 |
| A graphical method for analyzing distance restraints using residual dipolar couplings for structure determination of symmetric protein homo‐oligomers JW Martin, AK Yan, C Bailey‐Kellogg, P Zhou, BR Donald Protein Science 20 (6), 970-985, 2011 | 13 | 2011 |
| Computational analysis of energy landscapes reveals dynamic features that contribute to binding of inhibitors to CFTR-associated ligand GT Holt, JD Jou, NP Gill, AU Lowegard, JW Martin, DR Madden, ... The Journal of Physical Chemistry B 123 (49), 10441-10455, 2019 | 10 | 2019 |
| Systematic solution to homo‐oligomeric structures determined by NMR JW Martin, P Zhou, BR Donald Proteins: Structure, Function, and Bioinformatics 83 (4), 651-661, 2015 | 5 | 2015 |
| Geometric Algorithms for Protein Structure Determination Using Measurements From Nuclear Magnetic Resonance Spectroscopy JW Martin Duke University, 2014 | 5 | 2014 |
| On Algorithms for Structure Determination of Symmetric Proteins from Nuclear Magnetic Resonance Data JW Martin Duke University, 2009 | | 2009 |
| Redefining Structure: New Approaches for (1) Deep Topological Sampling of Protein Structures, and (2) Continuous Probability Density Function for Biomolecular Interdomain … Y Qi, J Martin, F Thélot, A Barb, A Yan, P Zhou, TG Oas, BR Donald | | |
