Xinghua (Mindy) Shi
Cited by
Cited by
A global reference for human genetic variation
1000 Genomes Project Consortium
Nature 526 (7571), 68, 2015
A map of human genome variation from population-scale sequencing
1000 Genomes Project Consortium
Nature 467 (7319), 1061, 2010
An integrated map of genetic variation from 1,092 human genomes.
GR Abecasis, A Auton, LD Brooks, MA DePristo, RM Durbin, ...
Nature 491 (7422), 56, 2012
An integrated map of structural variation in 2,504 human genomes
PH Sudmant, T Rausch, EJ Gardner, RE Handsaker, A Abyzov, ...
Nature 526 (7571), 75-81, 2015
Mapping copy number variation by population-scale genome sequencing
RE Mills, K Walter, C Stewart, RE Handsaker, K Chen, C Alkan, A Abyzov, ...
Nature 470 (7332), 59-65, 2011
Comprehensive assessment of array-based platforms and calling algorithms for detection of copy number variants
D Pinto, K Darvishi, X Shi, D Rajan, D Rigler, T Fitzgerald, AC Lionel, ...
Nature biotechnology 29 (6), 512-520, 2011
A survey of social-based routing in delay tolerant networks: Positive and negative social effects
Y Zhu, B Xu, X Shi, Y Wang
IEEE Communications Surveys & Tutorials 15 (1), 387-401, 2012
Integrative annotation of variants from 1092 humans: application to cancer genomics
E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ...
Science 342 (6154), 2013
Multi-platform discovery of haplotype-resolved structural variation in human genomes
MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ...
Nature communications 10 (1), 1-16, 2019
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
O Delaneau, J Marchini
Nature communications 5 (1), 1-9, 2014
The National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation
LK McNeil, C Reich, RK Aziz, D Bartels, M Cohoon, T Disz, RA Edwards, ...
Nucleic acids research 35 (suppl_1), D347-D353, 2007
Extensive genetic diversity and substructuring among zebrafish strains revealed through copy number variant analysis
KH Brown, KP Dobrinski, AS Lee, O Gokcumen, RE Mills, X Shi, ...
Proceedings of the National Academy of Sciences 109 (2), 529-534, 2012
A deep auto-encoder model for gene expression prediction
R Xie, J Wen, A Quitadamo, J Cheng, X Shi
BMC genomics 18 (9), 39-49, 2017
Refinement of primate copy number variation hotspots identifies candidate genomic regions evolving under positive selection
O Gokcumen, PL Babb, RC Iskow, Q Zhu, X Shi, RE Mills, I Ionita-Laza, ...
Genome biology 12 (5), 1-11, 2011
A Two-Graph Guided Multi-task Lasso Approach for eQTL Mapping
X Chen, X Shi, X Xu, Z Wang, R Mills, C Lee, J Xu
The fifteenth international conference on Artificial Intelligence and …, 2012
An overview of human genetic privacy
X Shi, X Wu
Annals of the New York Academy of Sciences 1387 (1), 61, 2017
Order-optimal data collection in wireless sensor networks: Delay and capacity
S Chen, Y Wang, XY Li, X Shi
2009 6th Annual IEEE Communications Society Conference on Sensor, Mesh and …, 2009
Effects of short indels on protein structure and function in human genomes
M Lin, S Whitmire, J Chen, A Farrel, X Shi, J Guo
Scientific reports 7 (1), 1-9, 2017
Data collection capacity of random-deployed wireless sensor networks
S Chen, Y Wang, XY Li, X Shi
GLOBECOM 2009-2009 IEEE Global Telecommunications Conference, 1-6, 2009
An Integrated Network of microRNA and Gene Expression in Ovarian Cancer
SX Quitadamo A, Tian L, Benika H
BMC Bioinformatics 16 (Suppl 5), S5, 2015
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