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Chen-Shan Chin / Jason Chin
Chen-Shan Chin / Jason Chin
DNAnexus
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Title
Cited by
Cited by
Year
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
CS Chin, DH Alexander, P Marks, AA Klammer, J Drake, C Heiner, ...
Nature methods 10 (6), 563-569, 2013
36042013
Phased diploid genome assembly with single-molecule real-time sequencing
CS Chin, P Peluso, FJ Sedlazeck, M Nattestad, GT Concepcion, A Clum, ...
Nature methods 13 (12), 1050-1054, 2016
12112016
Origins of the E. coli strain causing an outbreak of hemolytic–uremic syndrome in Germany
DA Rasko, DR Webster, JW Sahl, A Bashir, N Boisen, F Scheutz, ...
New England Journal of Medicine 365 (8), 709-717, 2011
9862011
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
K Berlin, S Koren, CS Chin, JP Drake, JM Landolin, AM Phillippy
Nature biotechnology 33 (6), 623-630, 2015
8802015
The origin of the Haitian cholera outbreak strain
CS Chin, J Sorenson, JB Harris, WP Robins, RC Charles, ...
New England Journal of Medicine 364 (1), 33-42, 2011
8372011
Improved maize reference genome with single-molecule technologies
Y Jiao, P Peluso, J Shi, T Liang, MC Stitzer, B Wang, MS Campbell, ...
Nature 546 (7659), 524-527, 2017
7852017
Validation of ITD mutations in FLT3 as a therapeutic target in human acute myeloid leukaemia
CC Smith, Q Wang, CS Chin, S Salerno, LE Damon, MJ Levis, AE Perl, ...
Nature 485 (7397), 260-263, 2012
7242012
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome
AM Wenger, P Peluso, WJ Rowell, PC Chang, RJ Hall, GT Concepcion, ...
Nature biotechnology 37 (10), 1155-1162, 2019
5932019
Comparing genomic expression patterns across species identifies shared transcriptional profile in aging
SA McCarroll, CT Murphy, S Zou, SD Pletcher, CS Chin, YN Jan, ...
Nature genetics 36 (2), 197-204, 2004
5052004
Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly
VA Schneider, T Graves-Lindsay, K Howe, N Bouk, HC Chen, PA Kitts, ...
Genome research 27 (5), 849-864, 2017
5022017
Assembly and diploid architecture of an individual human genome via single-molecule technologies
M Pendleton, R Sebra, AWC Pang, A Ummat, O Franzen, T Rausch, ...
Nature methods 12 (8), 780-786, 2015
4632015
Multi-platform discovery of haplotype-resolved structural variation in human genomes
MJP Chaisson, AD Sanders, X Zhao, A Malhotra, D Porubsky, T Rausch, ...
Nature communications 10 (1), 1-16, 2019
4522019
A flexible and efficient template format for circular consensus sequencing and SNP detection
KJ Travers, CS Chin, DR Rank, JS Eid, SW Turner
Nucleic acids research 38 (15), e159-e159, 2010
4242010
Long-read sequence assembly of the gorilla genome
D Gordon, J Huddleston, MJP Chaisson, CM Hill, ZN Kronenberg, ...
Science 352 (6281), aae0344, 2016
2952016
A hybrid approach for the automated finishing of bacterial genomes
A Bashir, AA Klammer, WP Robins, CS Chin, D Webster, E Paxinos, ...
Nature biotechnology 30 (7), 701-707, 2012
2102012
The complete sequence of a human genome
S Nurk, S Koren, A Rhie, M Rautiainen, AV Bzikadze, A Mikheenko, ...
Science 376 (6588), 44-53, 2022
1632022
Extending reference assembly models
DM Church, VA Schneider, KM Steinberg, MC Schatz, AR Quinlan, ...
Genome biology 16 (1), 1-5, 2015
1532015
HLA typing for the next generation
NP Mayor, J Robinson, AJM McWhinnie, S Ranade, K Eng, W Midwinter, ...
PLoS One 10 (5), e0127153, 2015
1452015
Long-read, whole-genome shotgun sequence data for five model organisms
KE Kim, P Peluso, P Babayan, PJ Yeadon, C Yu, WW Fisher, CS Chin, ...
Scientific data 1 (1), 1-10, 2014
1282014
De novo PacBio long-read and phased avian genome assemblies correct and add to reference genes generated with intermediate and short reads
J Korlach, G Gedman, SB Kingan, CS Chin, JT Howard, JN Audet, ...
Gigascience 6 (10), gix085, 2017
1232017
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