Iain MacCallum
Iain MacCallum
Broad Institute
Verified email at broadinstitute.org
Cited by
Cited by
Evolution of genes and genomes on the Drosophila phylogeny
Drosophila 12 Genomes Consortium
Nature 450 (7167), 203, 2007
High-quality draft assemblies of mammalian genomes from massively parallel sequence data
S Gnerre, I MacCallum, D Przybylski, FJ Ribeiro, JN Burton, BJ Walker, ...
Proceedings of the National Academy of Sciences 108 (4), 1513-1518, 2011
ALLPATHS: de novo assembly of whole-genome shotgun microreads
J Butler, I MacCallum, M Kleber, IA Shlyakhter, MK Belmonte, ES Lander, ...
Genome research 18 (5), 810-820, 2008
The genomic substrate for adaptive radiation in African cichlid fish
D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ...
Nature 513 (7518), 375-381, 2014
Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences
TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ...
Nature 447 (7141), 167-177, 2007
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species
KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ...
GigaScience 2 (1), 2047-217X-2-10, 2013
The African coelacanth genome provides insights into tetrapod evolution
CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, ...
Nature 496 (7445), 311-316, 2013
Assemblathon 1: a competitive assessment of de novo short read assembly methods
D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ...
Genome research 21 (12), 2224-2241, 2011
Finished bacterial genomes from shotgun sequence data
FJ Ribeiro, D Przybylski, S Yin, T Sharpe, S Gnerre, A Abouelleil, ...
Genome research 22 (11), 2270-2277, 2012
ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads
DBJ Iain MacCallum, Dariusz Przybylski, Sante Gnerre, Joshua Burton, Ilya ...
Genome biology 10, R103, 2009
Comprehensive variation discovery in single human genomes
NI Weisenfeld, S Yin, T Sharpe, B Lau, R Hegarty, L Holmes, B Sogoloff, ...
Nature genetics 46 (12), 1350, 2014
Paired-end sequencing of Fosmid libraries by Illumina
LJS Williams, DG Tabbaa, N Li, AM Berlin, TP Shea, I MacCallum, ...
Genome research 22 (11), 2241-2249, 2012
Processes and systems for nucleic acid sequence assembly
M Schnall-Levin, I MacCallum
US Patent 10,839,939, 2020
A case study on the parametric occurrence of multiple steady states
R Bradford, JH Davenport, M England, H Errami, V Gerdt, D Grigoriev, ...
Proceedings of the 2017 ACM on International Symposium on Symbolic and …, 2017
The measurement and modelling of light scattering by phytoplankton cells at narrow forward angles
I MacCallum, A Cunningham, D McKee
Journal of Optics A: Pure and Applied Optics 6 (7), 698, 2004
Measurement and modelling of phytoplankton light scattering
I MacCallum
University of Strathclyde, 2001
Systems and methods for assembling fragmented information
M Schnall-Levin, I MacCallum
US Patent App. 15/801,868, 2018
On-line version ISSN 1996-7489 Print version ISSN 0038-2353
CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum
S. Afr. j. sci 109 (5-6), 2013
The African coelacanth genome provides insights into tetrapod evolution
AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, T Manousaki, ...
Nature 7445 (496), 311-316.(2013), 2013
Methods and Resources
J Chen, YC Kim, YC Jung, Z Xuan, G Dworkin, Y Zhang, MQ Zhang, ...
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