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Xueqiu Lin
Xueqiu Lin
Assistant Professor, Fred Hutch
Verified email at fredhutch.org - Homepage
Title
Cited by
Cited by
Year
Development of CRISPR as an antiviral strategy to combat SARS-CoV-2 and influenza
TR Abbott, G Dhamdhere, Y Liu, X Lin, L Goudy, L Zeng, A Chemparathy, ...
Cell, 2020
4312020
Comparative analysis of metazoan chromatin organization
JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ...
Nature 512 (7515), 449-452, 2014
4092014
Broad H3K4me3 is associated with increased transcription elongation and enhancer activity at tumor-suppressor genes
K Chen, Z Chen, D Wu, L Zhang, X Lin, J Su, B Rodriguez, Y Xi, Z Xia, ...
Nature genetics, 2015
3142015
CRISPR-Mediated Programmable 3D Genome Positioning and Nuclear Organization
H Wang, X Xu, CM Nguyen, Y Liu, Y Gao, X Lin, T Daley, NH Kipniss, ...
Cell, 2018
1872018
CRISPR Activation Screens Systematically Identify Factors that Drive Neuronal Fate and Reprogramming
Y Liu, C Yu, TP Daley, F Wang, WS Cao, S Bhate, X Lin, C Still II, H Liu, ...
Cell Stem Cell, 2018
1762018
DNMT3A Loss Drives Enhancer Hypomethylation in FLT3-ITD-Associated Leukemias
L Yang, B Rodriguez, A Mayle, HJ Park, X Lin, M Luo, M Jeong, CV Curry, ...
Cancer cell 29 (6), 922-934, 2016
1562016
DNMT3A and TET1 cooperate to regulate promoter epigenetic landscapes in mouse embryonic stem cells
T Gu, X Lin, SM Cullen, M Luo, M Jeong, M Estecio, J Shen, S Hardikar, ...
Genome Biology 19 (1), 88, 2018
1512018
Homeobox oncogene activation by pan-cancer DNA hypermethylation
J Su, YH Huang, X Cui, X Wang, X Zhang, Y Lei, J Xu, X Lin, K Chen, J Lv, ...
Genome Biology 19 (1), 108, 2018
1052018
A benchmark of algorithms for the analysis of pooled CRISPR screens
S Bodapati, TP Daley, X Lin, J Zou, LS Qi
Genome Biology 21 (1), 1-13, 2020
602020
BSeQC: quality control of bisulfite sequencing experiments
X Lin, D Sun, B Rodriguez, Q Zhao, H Sun, Y Zhang, W Li
Bioinformatics, btt548, 2013
522013
Nested epistasis enhancer networks for robust genome regulation
X Lin, Y Liu, S Liu, X Zhu, L Wu, Y Zhu, D Zhao, X Xu, A Chemparathy, ...
Science, eabk3512, 2022
482022
CRISPhieRmix: a hierarchical mixture model for CRISPR pooled screens
TP Daley, Z Lin, X Lin, Y Liu, WH Wong, LS Qi
Genome biology 19 (1), 159, 2018
392018
Multiplexed genome regulation in vivo with hyper-efficient Cas12a
LY Guo, J Bian, AE Davis, P Liu, HR Kempton, X Zhang, A Chemparathy, ...
Nature Cell Biology, 1-11, 2022
372022
The disordered N-terminal domain of DNMT3A recognizes H2AK119ub and is required for postnatal development
T Gu, D Hao, J Woo, TW Huang, L Guo, X Lin, AG Guzman, A Tovy, ...
Nature Genetics, 1-12, 2022
342022
DNMT3A mutation leads to leukemic extramedullary infiltration mediated by TWIST1
J Xu, W Zhang, XJ Yan, XQ Lin, W Li, JQ Mi, JM Li, J Zhu, Z Chen, ...
Journal of Hematology & Oncology 9 (1), 106, 2016
342016
A comprehensive analysis and resource to use CRISPR-Cas13 for broad-spectrum targeting of RNA viruses
X Lin, Y Liu, A Chemparathy, T Pande, M La Russa, LS Qi
Cell Reports Medicine, 100245, 2021
302021
Broad-spectrum CRISPR-mediated inhibition of SARS-CoV-2 variants and endemic coronaviruses in vitro
L Zeng, Y Liu, XH Nguyenla, TR Abbott, M Han, Y Zhu, A Chemparathy, ...
Nature communications 13 (1), 2766, 2022
232022
CistromeFinder for ChIP-seq and DNase-seq data reuse
H Sun, B Qin, T Liu, Q Wang, J Liu, J Wang, X Lin, Y Yang, L Taing, ...
Bioinformatics 29 (10), 1352-1354, 2013
222013
PHF8 and REST/NRSF co-occupy gene promoters to regulate proximal gene expression
J Wang, X Lin, S Wang, C Wang, Q Wang, X Duan, P Lu, Q Wang, ...
Scientific reports 4, 2014
192014
Sparse conserved under-methylated CpGs are associated with high-order chromatin structure
X Lin, J Su, K Chen, B Rodriguez, W Li
Genome Biology 18 (1), 163, 2017
162017
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Articles 1–20