Jean-Philippe Vert - Google Scholar

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	All	Since 2015
Citations	15794	9012
h-index	63	45
i10-index	119	96

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Co-authors

laurent jacobCNRS, Université Lyon 1Verified email at univ-lyon1.fr
Francis BachInria - Ecole Normale SupérieureVerified email at inria.fr
Koji TsudaProfessor, GSFS, The University of TokyoVerified email at k.u-tokyo.ac.jp
William Stafford NobleProfessor of Genome Sciences, University of WashingtonVerified email at uw.edu
Bernhard SchölkopfDirector, Max Planck Institute for Intelligent Systems; Professor at ETH Zürich, and DistinguishedVerified email at tuebingen.mpg.de
Tatsuya AkutsuProfessor, Bioinformatics Center, Institute for Chemical Research, Kyoto UniversityVerified email at kuicr.kyoto-u.ac.jp
Emmanuel BarillotInstitut Curie, INSERM, Mines ParisTech, U900Verified email at curie.fr
Marco CuturiGoogle Brain / CREST-ENSAE.Verified email at google.com
Pierre MahébioMérieuxVerified email at biomerieux.com
Nelle VaroquauxCNRS, Université Grenoble AlpesVerified email at univ-grenoble-alpes.fr
Minoru KanehisaProfessor, Institute for Chemical Research, Kyoto UniversityVerified email at kuicr.kyoto-u.ac.jp
Andrei ZinovyevScientific coordinator of cancer systems biology at Institut Curie, PRAIRIE chairVerified email at curie.fr
kevin bleakleyINRIA, FranceVerified email at inria.fr
Yoshihiro YamanishiKyushu Institute of TechnologyVerified email at bio.kyutech.ac.jp
Valentina BoevaAssistant Prof., ETH Zürich, Department of Computer ScienceVerified email at inf.ethz.ch
Theodoros EvgeniouINSEADVerified email at insead.edu
Jacob AbernethyAssistant Professor, University of MichiganVerified email at umich.edu
Ferhat AyLa Jolla Institute for ImmunologyVerified email at lji.org
Guillaume ObozinskiSwiss Data Science CenterVerified email at epfl.ch
Davide RissoDepartment of Statistical Sciences, University of Padova, ItalyVerified email at unipd.it

Jean-Philippe Vert

Google Brain / Mines ParisTech

Verified email at mines-paristech.fr - Homepage

machine learning computational biology statistics bioinformatics artificial intelligence


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Wisdom of crowds for robust gene network inference D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ... Nature methods 9 (8), 796-804, 2012	1210	2012
Group lasso with overlap and graph lasso L Jacob, G Obozinski, JP Vert Proceedings of the 26th annual international conference on machine learning …, 2009	894	2009
Kernel methods in computational biology B Schölkopf, K Tsuda, JP Vert MIT press, 2004	812	2004
Protein homology detection using string alignment kernels H Saigo, JP Vert, N Ueda, T Akutsu Bioinformatics 20 (11), 1682-1689, 2004	458	2004
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing N Servant, N Varoquaux, BR Lajoie, E Viara, CJ Chen, JP Vert, E Heard, ... Genome biology 16 (1), 259, 2015	444	2015
A community effort to assess and improve drug sensitivity prediction algorithms Nature Biotechnology 32, 1202-1212, 2014	430	2014
Clustered multi-task learning: A convex formulation L Jacob, J Vert, FR Bach Advances in neural information processing systems, 745-752, 2009	414	2009
Support vector machine applications in computational biology WS Noble Kernel methods in computational biology 71, 92, 2004	366	2004
A path following algorithm for the graph matching problem M Zaslavskiy, F Bach, JP Vert IEEE Transactions on Pattern Analysis and Machine Intelligence 31 (12), 2227 …, 2008	345	2008
The influence of feature selection methods on accuracy, stability and interpretability of molecular signatures AC Haury, P Gestraud, JP Vert PloS one 6 (12), e28210, 2011	320	2011
Protein-ligand interaction prediction: an improved chemogenomics approach L Jacob, JP Vert Bioinformatics 24 (19), 2149-2156, 2008	301	2008
A primer on kernel methods JP Vert, K Tsuda, B Schölkopf Kernel methods in computational biology 47, 35-70, 2004	292	2004
Classification of microarray data using gene networks F Rapaport, A Zinovyev, M Dutreix, E Barillot, JP Vert BMC bioinformatics 8 (1), 35, 2007	291	2007
Protein network inference from multiple genomic data: a supervised approach Y Yamanishi, JP Vert, M Kanehisa Bioinformatics 20 (suppl_1), i363-i370, 2004	283	2004
TIGRESS: trustful inference of gene regulation using stability selection AC Haury, F Mordelet, P Vera-Licona, JP Vert BMC systems biology 6 (1), 145, 2012	266	2012
A New Approach to Collaborative Filtering: Operator Estimation with Spectral Regularization. J Abernethy, F Bach, T Evgeniou, JP Vert Journal of Machine Learning Research 10 (3), 2009	264	2009
An accurate and interpretable model for siRNA efficacy prediction JP Vert, N Foveau, C Lajaunie, Y Vandenbrouck BMC bioinformatics 7 (1), 520, 2006	257	2006
Graph kernels based on tree patterns for molecules P Mahé, JP Vert Machine learning 75 (1), 3-35, 2009	250	2009
Consistency of random forests E Scornet, G Biau, JP Vert Annals of Statistics 43 (4), 1716-1741, 2015	247	2015
Control-free calling of copy number alterations in deep-sequencing data using GC-content normalization V Boeva, A Zinovyev, K Bleakley, JP Vert, I Janoueix-Lerosey, O Delattre, ... Bioinformatics 27 (2), 268-269, 2011	241	2011

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