| The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update E Afgan, D Baker, B Batut, M Van Den Beek, D Bouvier, M Čech, J Chilton, ... Nucleic acids research 46 (W1), W537-W544, 2018 | 5746 | 2018 |
| The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update V Jalili, E Afgan, Q Gu, D Clements, D Blankenberg, J Goecks, J Taylor, ... Nucleic acids research 48 (W1), W395-W402, 2020 | 423 | 2020 |
| Dissemination of scientific software with Galaxy ToolShed D Blankenberg, G Von Kuster, E Bouvier, D Baker, E Afgan, N Stoler, ... Genome biology 15, 1-3, 2014 | 262 | 2014 |
| Scalable distributed computing hierarchy: Cloud, fog and dew computing K Skala, D Davidovic, E Afgan, I Sovic, Z Sojat Open Journal of Cloud Computing (OJCC) 2 (1), 16-24, 2015 | 250 | 2015 |
| Galaxy CloudMan: delivering cloud compute clusters E Afgan, D Baker, N Coraor, B Chapman, A Nekrutenko, J Taylor BMC bioinformatics 11, 1-6, 2010 | 222 | 2010 |
| Harnessing cloud computing with Galaxy Cloud E Afgan, D Baker, N Coraor, H Goto, IM Paul, KD Makova, A Nekrutenko, ... Nature biotechnology 29 (11), 972-974, 2011 | 139 | 2011 |
| Genomics virtual laboratory: a practical bioinformatics workbench for the cloud E Afgan, C Sloggett, N Goonasekera, I Makunin, D Benson, M Crowe, ... PloS one 10 (10), e0140829, 2015 | 124 | 2015 |
| Dynamics of mitochondrial heteroplasmy in three families investigated via a repeatable re-sequencing study H Goto, B Dickins, E Afgan, IM Paul, J Taylor, KD Makova, A Nekrutenko Genome biology 12, 1-16, 2011 | 118 | 2011 |
| BioBlend: automating pipeline analyses within Galaxy and CloudMan C Sloggett, N Goonasekera, E Afgan Bioinformatics 29 (13), 1685-1686, 2013 | 100 | 2013 |
| Inverting the model of genomics data sharing with the NHGRI Genomic Data Science Analysis, Visualization, and Informatics Lab-space MC Schatz, AA Philippakis, E Afgan, E Banks, VJ Carey, RJ Carroll, ... Cell Genomics 2 (1), 2022 | 87 | 2022 |
| CloudMan as a platform for tool, data, and analysis distribution E Afgan, B Chapman, J Taylor BMC bioinformatics 13, 1-7, 2012 | 62 | 2012 |
| Community-driven development for computational biology at Sprints, Hackathons and Codefests S Möller, E Afgan, M Banck, RJP Bonnal, T Booth, J Chilton, PJA Cock, ... BMC bioinformatics 15, 1-7, 2014 | 53 | 2014 |
| C ech M E Afgan, D Baker, M Van Den Beek, D Blankenberg, D Bouvier Chilton J, Clements D, Coraor N, Eberhard C, Grüning B, Guerler A, Hillman …, 2016 | 51 | 2016 |
| Galaxy: A gateway to tools in e-science E Afgan, J Goecks, D Baker, N Coraor, ... Guide to e-science: next generation scientific research and discovery, 145-177, 2011 | 38 | 2011 |
| Using cloud computing infrastructure with CloudBioLinux, CloudMan, and Galaxy E Afgan, B Chapman, M Jadan, V Franke, J Taylor Current protocols in bioinformatics 38 (1), 11.9. 1-11.9. 20, 2012 | 36 | 2012 |
| Grü ning B, Guerler A, Hillman-Jackson J, Von Kuster G, Rasche E, Soranzo N, Turaga N, Taylor J, Nekrutenko A, Goecks J. 2016 E Afgan, D Baker, M Van den Beek, D Blankenberg, D Bouvier, M Cˇech, ... The Galaxy platform for accessible, reproducible and collaborative …, 2016 | 33 | 2016 |
| Role of the Resource Broker in the Grid E Afgan Proceedings of the 42nd annual Southeast regional conference, 299-300, 2004 | 30 | 2004 |
| CloudLaunch: discover and deploy cloud applications E Afgan, A Lonie, J Taylor, N Goonasekera Future Generation Computer Systems 94, 802-810, 2019 | 25 | 2019 |
| Bio-Docklets: virtualization containers for single-step execution of NGS pipelines B Kim, T Ali, C Lijeron, E Afgan, K Krampis Gigascience 6 (8), gix048, 2017 | 22 | 2017 |
| Dynamic BLAST–a grid enabled BLAST E Afgan, P Bangalore The International Journal of Computer Science and Network Security 9 (4 …, 2009 | 20 | 2009 |
