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Melissa B. Duhaime
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Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
S Roux, JR Brum, BE Dutilh, S Sunagawa, MB Duhaime, A Loy, ...
Nature 537 (7622), 689-693, 2016
7552016
Minimum information about an uncultivated virus genome (MIUViG)
S Roux, EM Adriaenssens, BE Dutilh, EV Koonin, AM Kropinski, ...
Nature biotechnology 37 (1), 29-37, 2019
5132019
Microbes on a bottle: substrate, season and geography influence community composition of microbes colonizing marine plastic debris
S Oberbeckmann, AM Osborn, MB Duhaime
PLoS One 11 (8), e0159289, 2016
5012016
Fate of microplastics and other small anthropogenic litter (SAL) in wastewater treatment plants depends on unit processes employed
MR Michielssen, ER Michielssen, J Ni, MB Duhaime
Environmental Science: Water Research & Technology 2 (6), 1064-1073, 2016
4282016
Microplastics: addressing ecological risk through lessons learned
K Syberg, FR Khan, H Selck, A Palmqvist, GT Banta, J Daley, L Sano, ...
Environmental toxicology and chemistry 34 (5), 945-953, 2015
3652015
Sulfur oxidation genes in diverse deep-sea viruses
K Anantharaman, MB Duhaime, JA Breier, KA Wendt, BM Toner, GJ Dick
Science 344 (6185), 757-760, 2014
2652014
Cyanobacterial harmful algal blooms are a biological disturbance to Western Lake Erie bacterial communities
MA Berry, TW Davis, RM Cory, MB Duhaime, TH Johengen, GW Kling, ...
Environmental microbiology 19 (3), 1149-1162, 2017
2002017
Diagnostic potential and interactive dynamics of the colorectal cancer virome
GD Hannigan, MB Duhaime, MT Ruffin IV, CC Koumpouras, PD Schloss
MBio 9 (6), 10.1128/mbio. 02248-18, 2018
1982018
Distribution and modeled transport of plastic pollution in the Great Lakes, the world's largest freshwater resource
RN Cable, D Beletsky, R Beletsky, K Wigginton, BW Locke, MB Duhaime
Frontiers in Environmental Science 5, 45, 2017
1832017
Phage-specific metabolic reprogramming of virocells
C Howard-Varona, MM Lindback, GE Bastien, N Solonenko, AA Zayed, ...
The ISME journal 14 (4), 881-895, 2020
1742020
Towards quantitative metagenomics of wild viruses and other ultra‐low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method
MB Duhaime, L Deng, BT Poulos, MB Sullivan
Environmental microbiology 14 (9), 2526-2537, 2012
1712012
Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition
A Alberti, J Poulain, S Engelen, K Labadie, S Romac, I Ferrera, G Albini, ...
Scientific data 4 (1), 1-20, 2017
1692017
Single‐cell and population level viral infection dynamics revealed by phage FISH, a method to visualize intracellular and free viruses
E Allers, C Moraru, MB Duhaime, E Beneze, N Solonenko, ...
Environmental microbiology 15 (8), 2306-2318, 2013
1562013
Ocean viruses: rigorously evaluating the metagenomic sample-to-sequence pipeline
MB Duhaime, MB Sullivan
Virology 434 (2), 181-186, 2012
1102012
Microbial and viral communities and their antibiotic resistance genes throughout a hospital wastewater treatment system
ML Petrovich, A Zilberman, A Kaplan, GR Eliraz, Y Wang, K Langenfeld, ...
Frontiers in microbiology 11, 153, 2020
902020
The genetic and ecophysiological diversity of Microcystis
GJ Dick, MB Duhaime, JT Evans, RM Errera, CM Godwin, JJ Kharbush, ...
Environmental Microbiology 23 (12), 7278-7313, 2021
772021
Ecogenomics and genome landscapes of marine Pseudoalteromonas phage H105/1
MB Duhaime, A Wichels, J Waldmann, H Teeling, FO Glöckner
The ISME journal 5 (1), 107-121, 2011
752011
JCoast–A biologist-centric software tool for data mining and comparison of prokaryotic (meta) genomes
M Richter, T Lombardot, I Kostadinov, R Kottmann, MB Duhaime, ...
BMC bioinformatics 9, 1-9, 2008
642008
Megx. net: integrated database resource for marine ecological genomics
R Kottmann, I Kostadinov, MB Duhaime, PL Buttigieg, P Yilmaz, ...
Nucleic acids research 38 (suppl_1), D391-D395, 2010
602010
The changing face of winter: lessons and questions from the Laurentian Great Lakes
T Ozersky, AJ Bramburger, AK Elgin, HA Vanderploeg, J Wang, JA Austin, ...
Journal of Geophysical Research: Biogeosciences 126 (6), e2021JG006247, 2021
582021
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Articles 1–20