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John Calarco
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Heritable genome editing in C. elegans via a CRISPR-Cas9 system
AE Friedland, YB Tzur, KM Esvelt, MP Colaiácovo, GM Church, ...
Nature methods 10 (8), 741-743, 2013
10552013
Deciphering the splicing code
Y Barash, JA Calarco, W Gao, Q Pan, X Wang, O Shai, BJ Blencowe, ...
Nature 465 (7294), 53-59, 2010
9942010
Tissue-specific alternative splicing remodels protein-protein interaction networks
JD Ellis, M Barrios-Rodiles, R Colak, M Irimia, TH Kim, JA Calarco, ...
Molecular cell 46 (6), 884-892, 2012
4132012
Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2
L Cartegni, ML Hastings, JA Calarco, E De Stanchina, AR Krainer
The American Journal of Human Genetics 78 (1), 63-77, 2006
3322006
Regulation of vertebrate nervous system alternative splicing and development by an SR-related protein
JA Calarco, S Superina, D O'Hanlon, M Gabut, B Raj, Q Pan, U Skalska, ...
Cell 138 (5), 898-910, 2009
2152009
Global analysis of alternative splicing differences between humans and chimpanzees
JA Calarco, Y Xing, M Cáceres, JP Calarco, X Xiao, Q Pan, C Lee, ...
Genes & development 21 (22), 2963-2975, 2007
1972007
Genome-wide analysis of alternative splicing in Caenorhabditis elegans
AK Ramani, JA Calarco, Q Pan, S Mavandadi, Y Wang, AC Nelson, ...
Genome research 21 (2), 342-348, 2011
1702011
Role for PSF in mediating transcriptional activator-dependent stimulation of pre-mRNA processing in vivo
E Rosonina, JYY Ip, JA Calarco, MA Bakowski, A Emili, S McCracken, ...
Molecular and cellular biology 25 (15), 6734-6746, 2005
1442005
Heritable Custom Genomic Modifications in Caenorhabditis elegans via a CRISPR–Cas9 System
YB Tzur, AE Friedland, S Nadarajan, GM Church, JA Calarco, ...
Genetics 195 (3), 1181-1185, 2013
1432013
Recurrent noncoding U1 snRNA mutations drive cryptic splicing in SHH medulloblastoma
H Suzuki, SA Kumar, S Shuai, A Diaz-Navarro, A Gutierrez-Fernandez, ...
Nature 574 (7780), 707-711, 2019
1032019
Emerging roles of alternative pre-mRNA splicing regulation in neuronal development and function
AD Norris, JA Calarco
Frontiers in neuroscience 6, 122, 2012
952012
Networking in a global world: establishing functional connections between neural splicing regulators and their target transcripts
JA Calarco, M Zhen, BJ Blencowe
Rna 17 (5), 775-791, 2011
932011
Efficient Genome Editing in Caenorhabditis elegans with a Toolkit of Dual-Marker Selection Cassettes
AD Norris, HM Kim, MP Colaiácovo, JA Calarco
Genetics 201 (2), 449-458, 2015
902015
Genome-wide CRISPR-Cas9 interrogation of splicing networks reveals a mechanism for recognition of autism-misregulated neuronal microexons
T Gonatopoulos-Pournatzis, M Wu, U Braunschweig, J Roth, H Han, ...
Molecular cell 72 (3), 510-524. e12, 2018
632018
A pair of RNA-binding proteins controls networks of splicing events contributing to specialization of neural cell types
AD Norris, S Gao, ML Norris, D Ray, AK Ramani, AG Fraser, Q Morris, ...
Molecular cell 54 (6), 946-959, 2014
632014
Serotonin-dependent kinetics of feeding bursts underlie a graded response to food availability in C. elegans
KS Lee, S Iwanir, RB Kopito, M Scholz, JA Calarco, D Biron, E Levine
Nature communications 8 (1), 1-11, 2017
582017
Neuroendocrine modulation sustains the C. elegans forward motor state
MA Lim, J Chitturi, V Laskova, J Meng, D Findeis, A Wiekenberg, ...
Elife 5, e19887, 2016
442016
Technologies for the global discovery and analysis of alternative splicing.
JA Calarco, AL Saltzman, JY Ip, BJ Blencowe
Advances in experimental medicine and biology 623, 64-84, 2007
402007
A systematic characterization of Cwc21, the yeast ortholog of the human spliceosomal protein SRm300
M Khanna, H Van Bakel, X Tang, JA Calarco, T Babak, G Guo, A Emili, ...
Rna 15 (12), 2174-2185, 2009
392009
CRISPR-mediated genetic interaction profiling identifies RNA binding proteins controlling metazoan fitness
AD Norris, X Gracida, JA Calarco
Elife 6, e28129, 2017
242017
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