Carlos Henrique da Silveira
Carlos Henrique da Silveira
Professor, Federal University of Itajuba - UNIFEI
Verified email at
Cited by
Cited by
Protein cutoff scanning: A comparative analysis of cutoff dependent and cutoff free methods for prospecting contacts in proteins
CH da Silveira, DEV Pires, RC Minardi, C Ribeiro, CJM Veloso, ...
Proteins: Structure, Function, and Bioinformatics 74 (3), 727-743, 2009
Cutoff Scanning Matrix (CSM): structural classification and function prediction by protein inter-residue distance patterns
DEV Pires, RC de Melo-Minardi, MA dos Santos, CH da Silveira, ...
BMC genomics 12 (4), 1-11, 2011
aCSM: noise-free graph-based signatures to large-scale receptor-based ligand prediction
DEV Pires, RC de Melo-Minardi, CH Da Silveira, FF Campos, W Meira Jr
Bioinformatics 29 (7), 855-861, 2013
Finding protein-protein interaction patterns by contact map matching.
RC Melo, C Ribeiro, CS Murray, CJM Veloso, CH da Silveira, G Neshich, ...
Embrapa Informática Agropecuária-Artigo em periódico indexado (ALICE), 2007
Hydropace: understanding and predicting cross-inhibition in serine proteases through hydrophobic patch centroids
VM Gonçalves-Almeida, DEV Pires, RC de Melo-Minardi, CH da Silveira, ...
Bioinformatics 28 (3), 342-349, 2012
A contact map matching approach to protein structure similarity analysis
RC de Melo, CER Lopes, FA Fernandes Jr, CH da Silveira, MM Santoro, ...
Genet Mol Res 5 (2), 284-308, 2006
Molecular dynamics gives new insights into the glucose tolerance and inhibition mechanisms on β-glucosidases
LSC Costa, DCB Mariano, REO Rocha, J Kraml, CH Silveira, KR Liedl, ...
Molecules 24 (18), 3215, 2019
Analysis of binding properties and specificity through identification of the interface forming residues (IFR) for serine proteases in silico docked to different inhibitors
C Ribeiro, RC Togawa, IAP Neshich, I Mazoni, AL Mancini, ...
BMC structural biology 10 (1), 1-16, 2010
On the characterization of energy networks of proteins
CJ Veloso, CH Silveira, RC Melo, C Ribeiro, JC Lopes, MM Santoro, ...
Genet. Mol. Res 6 (4), 799-820, 2007
Enzymap: Exploiting protein annotation for modeling and predicting ec number changes in uniprot/swiss-prot
SA Silveira, RC de Melo-Minardi, CH da Silveira, MM Santoro, W Meira Jr
PloS one 9 (2), e89162, 2014
ADVISe: Visualizing the dynamics of enzyme annotations in UniProt/Swiss-Prot
SA Silveira, AO Rodrigues, RC de Melo-Minardi, CH da Silveira, W Meira
2012 IEEE Symposium on Biological Data Visualization (BioVis), 49-56, 2012
EasyVS: a user-friendly web-based tool for molecule library selection and structure-based virtual screening
DEV Pires, WNP Veloso, YC Myung, CHM Rodrigues, M Silk, ...
Bioinformatics 36 (14), 4200-4202, 2020
Gremlin: A graph mining strategy to infer protein-ligand interaction patterns
CA Santana, FR Cerqueira, CH Da Silveira, AV Fassio, ...
2016 IEEE 16th International Conference on Bioinformatics and Bioengineering …, 2016
PDBest: a user–friendly platform for manipulating and enhancing protein structures
WRS Goncalves, VM Goncalves-Almeida, AL Arruda, W Meira Jr, ...
Bioinformatics 31 (17), 2894-2896, 2015
An image-matching approach to protein similarity analysis
F Fernandes, CER Lopes, RC de Melo, MM Santoro, RL Carceroni, ...
Proceedings. 17th Brazilian Symposium on Computer Graphics and Image …, 2004
Pdbest: Pdb enhanced structures toolkit
DEV Pires, CH Da Silveira, MM Santoro, W Meira
In Proceedings of the 3rd International Conference of Brazilian Association …, 2007
visGReMLIN: graph mining-based detection and visualization of conserved motifs at 3D protein-ligand interface at the atomic level
VS Ribeiro, CA Santana, AV Fassio, FR Cerqueira, CH da Silveira, ...
BMC bioinformatics 21 (2), 1-12, 2020
Revealing protein-ligand interaction patterns through frequent subgraph mining
SA Silveira, AV Fassio, CH da Silveira, RC de Melo-Minardi
Proceedings of the International Conference on Bioinformatics …, 2015
An interactive strategy to visualize common subgraphs in protein-ligand interaction
AV Fassio, CA Santana, FR Cerqueira, CH da Silveira, JPR Romanelli, ...
International Conference on Bioinformatics and Biomedical Engineering, 383-394, 2018
How to compute protein residue contacts more accurately?
PM Martins, VD Mayrink, S de A. Silveira, CH da Silveira, LHF de Lima, ...
Proceedings of the 33rd Annual ACM Symposium on Applied Computing, 60-67, 2018
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