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Haiyan Huang, Professor
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An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
118442012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
56202007
Molecular characterization of the tumor microenvironment in breast cancer
M Allinen, R Beroukhim, L Cai, C Brennan, J Lahti-Domenici, H Huang, ...
Cancer cell 6 (1), 17-32, 2004
14712004
A Draft Sequence for the Genome of the Domesticated Silkworm (Bombyx mori)
Biology Analysis Group, Q Xia, Z Zhou, C Lu, D Cheng, F Dai, B Li, ...
Science 306 (5703), 1937-1940, 2004
13152004
Measuring reproducibility of high-throughput experiments
Q Li, JB Brown, H Huang, PJ Bickel
The annals of applied statistics 5 (3), 1752-1779, 2011
8572011
Genomic analysis of mouse retinal development
S Blackshaw, S Harpavat, J Trimarchi, L Cai, H Huang, WP Kuo, G Weber, ...
PLoS biology 2 (9), e247, 2004
6192004
Comparative analysis of the transcriptome across distant species
MB Gerstein, J Rozowsky, KK Yan, D Wang, C Cheng, JB Brown, ...
Nature 512 (7515), 445-448, 2014
2932014
Temporal Dissection of Tumorigenesis in Primary CancersTemporal Dissection of Tumorigenesis in Primary Cancers
S Durinck, C Ho, NJ Wang, W Liao, LR Jakkula, EA Collisson, J Pons, ...
Cancer discovery 1 (2), 137-143, 2011
2452011
Comparative analysis of regulatory information and circuits across distant species
AP Boyle, CL Araya, C Brdlik, P Cayting, C Cheng, Y Cheng, K Gardner, ...
Nature 512 (7515), 453-456, 2014
1962014
Profiling protein expression in circulating tumour cells using microfluidic western blotting
E Sinkala, E Sollier-Christen, C Renier, E Rosas-Canyelles, J Che, ...
Nature communications 8 (1), 1-12, 2017
1832017
Functional annotation and network reconstruction through cross-platform integration of microarray data
XJ Zhou, MCJ Kao, H Huang, A Wong, J Nunez-Iglesias, M Primig, ...
Nature biotechnology 23 (2), 238-243, 2005
1832005
Review on statistical methods for gene network reconstruction using expression data
YXR Wang, H Huang
Journal of theoretical biology 362, 53-61, 2014
1812014
Sparse linear modeling of next-generation mRNA sequencing (RNA-Seq) data for isoform discovery and abundance estimation
JJ Li, CR Jiang, JB Brown, H Huang, PJ Bickel
Proceedings of the National Academy of Sciences 108 (50), 19867-19872, 2011
1662011
Finding short DNA motifs using permuted Markov models
X Zhao, H Huang, TP Speed
Proceedings of the eighth annual international conference on Resaerch in …, 2004
1292004
Distributional regimes for the number of k-word matches between two random sequences
RA Lippert, H Huang, MS Waterman
Proceedings of the National Academy of Sciences 99 (22), 13980-13989, 2002
1172002
Clustering analysis of SAGE data using a Poisson approach
L Cai, H Huang, S Blackshaw, JS Liu, C Cepko, WH Wong
Genome biology 5 (7), 1-9, 2004
1122004
Systematic discovery of functional modules and context-specific functional annotation of human genome
Y Huang, H Li, H Hu, X Yan, MS Waterman, H Huang, XJ Zhou
Bioinformatics 23 (13), i222-i229, 2007
1072007
Comparison of D. melanogaster and C. elegans developmental stages, tissues, and cells by modENCODE RNA-seq data
JJ Li, H Huang, PJ Bickel, SE Brenner
Genome research 24 (7), 1086-1101, 2014
952014
Subsampling methods for genomic inference
PJ Bickel, N Boley, JB Brown, H Huang, NR Zhang
The Annals of Applied Statistics, 1660-1697, 2010
782010
Bayesian approach to transforming public gene expression repositories into disease diagnosis databases
H Huang, CC Liu, XJ Zhou
Proceedings of the National Academy of Sciences 107 (15), 6823-6828, 2010
682010
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Articles 1–20