| Comparative genomic analysis of the class Epsilonproteobacteria and proposed reclassification to Epsilonbacteraeota (phyl. nov.) DW Waite, I Vanwonterghem, C Rinke, DH Parks, Y Zhang, K Takai, ... Frontiers in Microbiology 8, 682, 2017 | 359 | 2017 |
| Three-dimensional structural view of the central metabolic network of Thermotoga maritima Y Zhang, I Thiele, D Weekes, Z Li, L Jaroszewski, K Ginalski, AM Deacon, ... Science 325 (5947), 1544-1549, 2009 | 224 | 2009 |
| CutDB: a proteolytic event database Y Igarashi, A Eroshkin, S Gramatikova, K Gramatikoff, Y Zhang, JW Smith, ... Nucleic acids research 35 (suppl_1), D546-D549, 2007 | 156 | 2007 |
| Between order and disorder in protein structures: analysis of “dual personality” fragments in proteins Y Zhang, B Stec, A Godzik Structure 15 (9), 1141-1147, 2007 | 96 | 2007 |
| Global distribution of conformational states derived from redundant models in the PDB points to non-uniqueness of the protein structure PV Burra, Y Zhang, A Godzik, B Stec Proceedings of the National Academy of Sciences 106 (26), 10505-10510, 2009 | 87 | 2009 |
| Pan-genome analyses identify lineage-and niche-specific markers of evolution and adaptation in Epsilonproteobacteria Y Zhang, SM Sievert Frontiers in microbiology 5, 2014 | 81 | 2014 |
| Addendum: comparative genomic analysis of the class Epsilonproteobacteria and proposed reclassification to Epsilonbacteraeota (phyl. nov.) DW Waite, I Vanwonterghem, C Rinke, DH Parks, Y Zhang, K Takai, ... Frontiers in Microbiology 9, 369739, 2018 | 77 | 2018 |
| Structural determinants of limited proteolysis MD Kazanov, Y Igarashi, AM Eroshkin, P Cieplak, B Ratnikov, Y Zhang, ... Journal of proteome research 10 (8), 3642-3651, 2011 | 68 | 2011 |
| The FGGY carbohydrate kinase family: insights into the evolution of functional specificities Y Zhang, O Zagnitko, I Rodionova, A Osterman, A Godzik PLoS computational biology 7 (12), e1002318, 2011 | 67 | 2011 |
| From the raw bar to the bench: Bivalves as models for human health JAF Robledo, R Yadavalli, B Allam, EP Espinosa, M Gerdol, S Greco, ... Developmental & Comparative Immunology 92, 260-282, 2019 | 64 | 2019 |
| PMAP: databases for analyzing proteolytic events and pathways Y Igarashi, E Heureux, KS Doctor, P Talwar, S Gramatikova, K Gramatikoff, ... Nucleic acids research 37 (suppl_1), D611-D618, 2009 | 60 | 2009 |
| Evolution of the natural transformation protein, ComEC, in bacteria ZT Pimentel, Y Zhang Frontiers in Microbiology 9, 423037, 2018 | 46 | 2018 |
| PSAMM: a portable system for the analysis of metabolic models JL Steffensen, K Dufault-Thompson, Y Zhang PLoS computational biology 12 (2), e1004732, 2016 | 45 | 2016 |
| The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest C Rispe, F Legeai, PD Nabity, R Fernández, AK Arora, P Baa-Puyoulet, ... BMC biology 18, 1-25, 2020 | 40 | 2020 |
| Microbiome Analysis Reveals Diversity and Function of Mollicutes Associated with the Eastern Oyster, Crassostrea virginica ZT Pimentel, K Dufault-Thompson, KT Russo, AK Scro, RM Smolowitz, ... Msphere 6 (3), 10.1128/msphere. 00227-21, 2021 | 30 | 2021 |
| Multiple integrated metabolic strategies allow foraminiferan protists to thrive in anoxic marine sediments F Gomaa, DR Utter, C Powers, DJ Beaudoin, VP Edgcomb, HL Filipsson, ... Science Advances 7 (22), eabf1586, 2021 | 23 | 2021 |
| Leave no stone unturned: individually adapted xerotolerant Thaumarchaeota sheltered below the boulders of the Atacama Desert hyperarid core Y Hwang, D Schulze-Makuch, FL Arens, JS Saenz, PS Adam, C Sager, ... Microbiome 9, 1-17, 2021 | 20 | 2021 |
| Variation in genome content and predatory phenotypes between Bdellovibrio sp. NC01 isolated from soil and B. bacteriovorus type strain HD100 LE Williams, N Cullen, JA DeGiorgis, KJ Martinez, J Mellone, M Oser, ... MICROBIOLOGY 165, 1315-1330, 2019 | 15 | 2019 |
| A Genome-Scale Model of Shewanella piezotolerans Simulates Mechanisms of Metabolic Diversity and Energy Conservation K Dufault-Thompson, H Jian, R Cheng, J Li, F Wang, Y Zhang Msystems 2 (2), 10.1128/msystems. 00165-16, 2017 | 14 | 2017 |
| Genome-Scale Metabolic Model of Caldicellulosiruptor bescii Reveals Optimal Metabolic Engineering Strategies for Bio-based Chemical Production K Zhang, W Zhao, DA Rodionov, GM Rubinstein, DN Nguyen, ... Msystems 6 (3), 10.1128/msystems. 01351-20, 2021 | 12 | 2021 |
Adam GodzikProfessor, University of California Riverside School of Medicineכתובת אימייל מאומתת בדומיין medsch.ucr.edu
