Simon Mitternacht
Simon Mitternacht
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FreeSASA: An open source C library for solvent accessible surface area calculations
S Mitternacht
F1000Research 5, 2016
Dissecting the mechanical unfolding of ubiquitin
A Irbäck, S Mitternacht, S Mohanty
Proceedings of the National Academy of Sciences 102 (38), 13427-13432, 2005
SPACER: server for predicting allosteric communication and effects of regulation
A Goncearenco, S Mitternacht, T Yong, B Eisenhaber, F Eisenhaber, ...
Nucleic acids research 41 (W1), W266-W272, 2013
Binding leverage as a molecular basis for allosteric regulation
S Mitternacht, IN Berezovsky
PLoS computational biology 7 (9), e1002148, 2011
An effective all-atom potential for proteins
S Mitternacht, S Mohanty, A Irbäck
PMC Biophys 2 (2), 2009
Comparing the folding free‐energy landscapes of Aβ42 variants with different aggregation properties
S Mitternacht, I Staneva, T Härd, A Irbäck
Proteins: Structure, Function, and Bioinformatics 78 (12), 2600-2608, 2010
Spontaneous β‐barrel formation: An all‐atom Monte Carlo study of Aβ16–22 oligomerization
A Irbäck, S Mitternacht
Proteins: Structure, Function, and Bioinformatics 71 (1), 207-214, 2008
Monte Carlo study of the formation and conformational properties of dimers of Aβ42 variants
S Mitternacht, I Staneva, T Härd, A Irbäck
Journal of molecular biology 410 (2), 357-367, 2011
Coherent conformational degrees of freedom as a structural basis for allosteric communication
S Mitternacht, IN Berezovsky
PLoS computational biology 7 (12), e1002301, 2011
Unraveling hidden regulatory sites in structurally homologous metalloproteases
Y Udi, M Fragai, M Grossman, S Mitternacht, R Arad-Yellin, V Calderone, ...
Journal of molecular biology 425 (13), 2330-2346, 2013
Changing the mechanical unfolding pathway of FnIII10 by tuning the pulling strength
S Mitternacht, S Luccioli, A Torcini, A Imparato, A Irbäck
Biophysical Journal 96 (2), 429-441, 2009
A geometry-based generic predictor for catalytic and allosteric sites
S Mitternacht, IN Berezovsky
Protein Engineering Design and Selection 24 (4), 405-409, 2011
Thermal versus mechanical unfolding of ubiquitin
A Irbäck, S Mitternacht
PROTEINS: Structure, Function, and Bioinformatics 65 (3), 759-766, 2006
Unfolding times for proteins in a force clamp
S Luccioli, A Imparato, S Mitternacht, A Irbäck, A Torcini
Physical Review E 81 (1), 010902, 2010
Mechanical resistance in unstructured proteins
SÆ Jónsson, S Mitternacht, A Irbäck
Biophysical Journal 104 (12), 2725-2732, 2013
Differences in solution behavior among four semiconductor-binding peptides
S Mitternacht, S Schnabel, M Bachmann, W Janke, A Irbäck
The Journal of Physical Chemistry B 111 (17), 4355-4360, 2007
Protein folding, aggregation and unfolding in Monte Carlo simulations
S Mohanty, A Irbäck, S Mitternacht, G Favrin, UHE Hansmann
Physics Procedia 7, 68-71, 2010
20th Annual Workshop on Recent Developments in Computer Simulation Studies in Condensed Matter Physics, CSP-2007 Том. 7. Computer Simulation Studies in Condensed Matter Physics …
B Berche, P Butera, LN Shchur, BA Berg, W Janke, K Binder, F Cinti, ...
Protein dynamics: aggregation and mechanical unfolding
S Mitternacht
Lund University, Department of Theoretical Physics, Computational Biology …, 2009
Protein Aggregation and Unfolding Studied Using an All-Atom Model with a Simplified Energy Function
A Irback, S Mitternacht
NIC Workshop 2006: From Computational Biophysics to Systems Biology 34, 15-20, 2006
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