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Michelle Holko
Michelle Holko
Airfinity, ICSI Berkeley, Defensive BioTech LLC
Verified email at icsi.berkeley.edu
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Cited by
Year
NCBI GEO: archive for functional genomics data sets—update
T Barrett, SE Wilhite, P Ledoux, C Evangelista, IF Kim, M Tomashevsky, ...
Nucleic acids research 41 (D1), D991-D995, 2012
87102012
Activation of the interferon system by short-interfering RNAs
CA Sledz, M Holko, MJ De Veer, RH Silverman, BRG Williams
Nature cell biology 5 (9), 834-839, 2003
19542003
NCBI GEO: archive for functional genomics data sets—10 years on
T Barrett, DB Troup, SE Wilhite, P Ledoux, C Evangelista, IF Kim, ...
Nucleic acids research 39 (suppl_1), D1005-D1010, 2010
12632010
Functional classification of interferon-stimulated genes identified using microarrays
MJ de Veer, M Holko, M Frevel, E Walker, S Der, JM Paranjape, ...
Journal of leukocyte biology 69 (6), 912-920, 2001
12372001
Annotating the human genome with Disease Ontology
JD Osborne, J Flatow, M Holko, SM Lin, WA Kibbe, L Zhu, MI Danila, ...
BMC genomics 10, 1-8, 2009
2942009
Induction of interferon-stimulated gene expression and antiviral responses require protein deacetylase activity
HM Chang, M Paulson, M Holko, CM Rice, BRG Williams, I Marié, ...
Proceedings of the National Academy of Sciences 101 (26), 9578-9583, 2004
2682004
From disease ontology to disease-ontology lite: statistical methods to adapt a general-purpose ontology for the test of gene-ontology associations
P Du, G Feng, J Flatow, J Song, M Holko, WA Kibbe, SM Lin
Bioinformatics 25 (12), i63-i68, 2009
1342009
Promyelocytic leukemia zinc finger protein regulates interferon-mediated innate immunity
D Xu, M Holko, AJ Sadler, B Scott, S Higashiyama, W Berkofsky-Fessler, ...
Immunity 30 (6), 802-816, 2009
1222009
Lipid metabolism genes in contralateral unaffected breast and estrogen receptor status of breast cancer
J Wang, D Scholtens, M Holko, D Ivancic, O Lee, H Hu, RT Chatterton Jr, ...
Cancer Prevention Research 6 (4), 321-330, 2013
822013
Expression of IFITM1 in chronic myeloid leukemia patients
CB Akyerli, M Beksac, M Holko, M Frevel, K Dalva, U Özbek, E Soydan, ...
Leukemia research 29 (3), 283-286, 2005
492005
Wearable fitness tracker use in federally qualified health center patients: strategies to improve the health of all of us using digital health devices
M Holko, TR Litwin, F Munoz, KI Theisz, L Salgin, NP Jenks, BW Holmes, ...
NPJ Digital Medicine 5 (1), 53, 2022
302022
NCBI GEO: archive for functional genomics data sets-10 years on
B Tanya, DB Troup, SE Wilhite, L Pierre, E Carlos, IF Kim, T Maxim, ...
Nucleic Acids Res 39 (Database issue), 1005-1010, 2013
292013
Functional Annotation of IFN-α-Stimulated Gene Expression Profiles from Sensitive and Resistant Renal Cell Carcinoma Cell Lines
M Holko, BRG Williams
Journal of interferon & cytokine research 26 (8), 534-547, 2006
232006
How Fitbit data are being made available to registered researchers in All of Us Research Program
H Master, A Kouame, K Marginean, M Basford, P Harris, M Holko
PACIFIC SYMPOSIUM ON BIOCOMPUTING 2023: Kohala Coast, Hawaii, USA, 3–7 …, 2022
12022
Analysis of high and low risk chronic myeloid leukemia by gene expression profiling.
CB Akyerli, M Beksac, M Holko, M Frevel, K Dalva, G Gurman, O Ilhan, ...
Blood 100 (11), 365A-365A, 2002
12002
Harnessing consumer wearable digital biomarkers for individualized recognition of postpartum depression using the All of Us Research Program dataset
E Hurwitz, Z Butzin-Dozier, H Master, ST O’Neil, A Walden, M Holko, ...
medRxiv, 2023
2023
Session Introduction: Digital health technology data in biocomputing: Research efforts and considerations for expanding access (PSB2024)
M Holko, C Lunt, J Dunn
PACIFIC SYMPOSIUM ON BIOCOMPUTING 2024, 163-169, 2023
2023
Biomedical research in the Cloud: considerations for researchers and organizations moving to (or adding) cloud computing resources
M Holko, N Weber, C Lunt, SE Brenner
PACIFIC SYMPOSIUM ON BIOCOMPUTING 2023: Kohala Coast, Hawaii, USA, 3–7 …, 2022
2022
Expression of lipid metabolism genes in contralateral unaffected breast associated with estrogen receptor status of breast cancer
J Wang, D Scholtens, M Holko, D Ivancic, O Lee, H Hu, RT Chatterton, ...
CANCER RESEARCH 72, 2012
2012
Abstract P2-10-30: Expression of lipid metabolism genes in contralateral unaffected breast associated with estrogen receptor status of breast cancer
J Wang, D Scholtens, M Holko, D Ivancic, O Lee, H Hu, RT Chatterton, ...
Cancer Research 72 (24_Supplement), P2-10-30-P2-10-30, 2012
2012
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