Nir Atias
Nir Atias
PhD Student, Tel Aviv University
Verified email at - Homepage
Cited by
Cited by
Combining drug and gene similarity measures for drug-target elucidation
L Perlman, A Gottlieb, N Atias, E Ruppin, R Sharan
Journal of computational biology 18 (2), 133-145, 2011
An algorithmic framework for predicting side effects of drugs
N Atias, R Sharan
Journal of Computational Biology 18 (3), 207-218, 2011
Alternative splicing regulates biogenesis of miRNAs located across exon-intron junctions
Z Melamed, A Levy, R Ashwal-Fluss, G Lev-Maor, K Mekahel, N Atias, ...
Molecular cell 50 (6), 869-881, 2013
ANAT: a tool for constructing and analyzing functional protein networks
N Yosef, E Zalckvar, AD Rubinstein, M Homilius, N Atias, L Vardi, ...
Science signaling 4 (196), pl1-pl1, 2011
Metabolic network prediction of drug side effects
I Shaked, MA Oberhardt, N Atias, R Sharan, E Ruppin
Cell systems 2 (3), 209-213, 2016
Comparative analysis of protein networks: hard problems, practical solutions
N Atias, R Sharan
Communications of the ACM 55 (5), 88-97, 2012
PJ Denning
Communications of the ACM 55 (12), 33-35, 2012
A network-based analysis of colon cancer splicing changes reveals a tumorigenesis-favoring regulatory pathway emanating from ELK1
D Hollander, M Donyo, N Atias, K Mekahel, Z Melamed, S Yannai, ...
Genome research 26 (4), 541-553, 2016
Regulation of Sec16 levels and dynamics links proliferation and secretion
KD Tillmann, V Reiterer, F Baschieri, J Hoffmann, V Millarte, MA Hauser, ...
Journal of cell science 128 (4), 670-682, 2015
Experimental design schemes for learning Boolean network models
N Atias, M Gershenzon, K Labazin, R Sharan
Bioinformatics 30 (17), i445-i452, 2014
Pathway-based analysis of genomic variation data
N Atias, S Istrail, R Sharan
Current opinion in genetics & development 23 (6), 622-626, 2013
iPoint: an integer programming based algorithm for inferring protein subnetworks
N Atias, R Sharan
Molecular BioSystems 9 (7), 1662-1669, 2013
A genetic screen for high copy number suppressors of the synthetic lethality between elg1Δ and srs2Δ in yeast
I Gazy, B Liefshitz, A Bronstein, O Parnas, N Atias, R Sharan, M Kupiec
G3: Genes, Genomes, Genetics 3 (5), 917-926, 2013
ANAT 2.0: reconstructing functional protein subnetworks
Y Almozlino, N Atias, D Silverbush, R Sharan
BMC bioinformatics 18 (1), 1-5, 2017
Systematic identification and correction of annotation errors in the genetic interaction map of Saccharomyces cerevisiae
N Atias, M Kupiec, R Sharan
Nucleic acids research 44 (5), e50-e50, 2016
An algorithmic framework for predicting side-effects of drugs
N Atias, R Sharan
Annual International Conference on Research in Computational Molecular …, 2010
An Algorithmic Framework for Predicting Side-Effects of Drugs
N Atias, R Sharan
Research in Computational Molecular Biology: 14th Annual International …, 2010
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