| microRNA-mediated repression of rolled leaf1 specifies maize leaf polarity MT Juarez, JS Kui, J Thomas, BA Heller, MCP Timmermans Nature 428 (6978), 84-88, 2004 | 815 | 2004 |
| Maintenance of genomic imprinting at the Arabidopsis medea locus requires zygotic DDM1 activity JP Vielle-Calzada, J Thomas, C Spillane, A Coluccio, MA Hoeppner, ... Genes & development 13 (22), 2971-2982, 1999 | 407 | 1999 |
| Direct Repression of KNOX Loci by the ASYMMETRIC LEAVES1 Complex of Arabidopsis M Guo, J Thomas, G Collins, MCP Timmermans The Plant Cell 20 (1), 48-58, 2008 | 340 | 2008 |
| Maize rough sheath2 and Its Arabidopsis Orthologue ASYMMETRIC LEAVES1 Interact with HIRA, a Predicted Histone Chaperone, to Maintain knox Gene … TL Phelps-Durr, J Thomas, P Vahab, MCP Timmermans The Plant Cell 17 (11), 2886-2898, 2005 | 230 | 2005 |
| SpliceGrapher: detecting patterns of alternative splicing from RNA-Seq data in the context of gene models and EST data MF Rogers, J Thomas, ASN Reddy, A Ben-Hur Genome biology 13, 1-17, 2012 | 165 | 2012 |
| Identification of genomic regions controlling chalkiness and grain characteristics in a recombinant inbred line rice population based on high-throughput SNP markers Y Dwiningsih, A Kumar, J Thomas, C Ruiz, J Alkahtani, A Al-Hashimi, ... Genes 12 (11), 1690, 2021 | 123 | 2021 |
| Quantitative trait loci and candidate gene identification for chlorophyll content in RIL rice population under drought conditions Y Dwiningsih, A Kumar, J Thomas, C Ruiz, J Alkahtani, N Baisakh, ... Indonesian Journal of Natural Pigments 3 (2), 54-54, 2021 | 121 | 2021 |
| Molecular genetic analysis of drought resistance and productivity in US rice cultivars Y Dwiningsih, A Kumar, J Thomas, S Yingling, A Pereira Plant and Animal Genome XXVII Conference (January 12-16, 2019), 2019 | 119 | 2019 |
| Molecular genetic analysis of drought resistance and productivity mechanisms in rice Y Dwiningsih, J Thomas, A Kumar, C Gupta, C Ruiz, S Yingling, ... Plant and Animal Genome XXVIII Conference, 11-15, 2020 | 117 | 2020 |
| Identification of QTLs and candidate loci associated with drought-related traits of the K/Z RIL rice population Y Dwiningsih, J Thomas, A Kumar, C Gupta, N Gill, C Ruiz, J Alkahtani, ... | 116 | 2022 |
| QTLs analysis and identification of candidate genes for flag leaf characteristics related to grain yield in US RIL rice population under drought conditions Y Dwiningsih, A Kumar, J Thomas, C Gupta, C Ruiz, N Baisakh, A Pereira ASA, CSSA, SSSA International Annual Meeting. ASA-CSSA-SSSA, 2021 | 113 | 2021 |
| Genome-wide analysis of alternative splicing in Chlamydomonas reinhardtii A Labadorf, A Link, MF Rogers, J Thomas, ASN Reddy, A Ben-Hur BMC genomics 11, 1-10, 2010 | 97 | 2010 |
| Interactions of SR45, an SR‐like protein, with spliceosomal proteins and an intronic sequence: insights into regulated splicing IS Day, M Golovkin, SG Palusa, A Link, GS Ali, J Thomas, DN Richardson, ... The Plant Journal 71 (6), 936-947, 2012 | 76 | 2012 |
| Identification of an intronic splicing regulatory element involved in auto‐regulation of alternative splicing of SCL33 pre‐mRNA J Thomas, SG Palusa, KVSK Prasad, GS Ali, GK Surabhi, A Ben‐Hur, ... The Plant Journal 72 (6), 935-946, 2012 | 73 | 2012 |
| The Maize TF ome–development of a transcription factor open reading frame collection for functional genomics B Burdo, J Gray, MP Goetting‐Minesky, B Wittler, M Hunt, T Li, ... The Plant Journal 80 (2), 356-366, 2014 | 70 | 2014 |
| Cold tolerance response mechanisms revealed through comparative analysis of gene and protein expression in multiple rice genotypes GM de Freitas, J Thomas, R Liyanage, JO Lay, S Basu, V Ramegowda, ... PLoS One 14 (6), e0218019, 2019 | 48 | 2019 |
| RNA sequencing analysis of salt tolerance in soybean (Glycine max) A Zeng, P Chen, KL Korth, J Ping, J Thomas, C Wu, S Srivastava, ... Genomics 111 (4), 629-635, 2019 | 36 | 2019 |
| Genetic dissection of grain yield component traits under high nighttime temperature stress in a rice diversity panel A Kumar, C Gupta, J Thomas, A Pereira Frontiers in plant science 12, 712167, 2021 | 9 | 2021 |
| Systems Genetics Analysis of Heat Stress Tolerance in Rice A Kumar, C Gupta, V Ramegowda, S Basu, A Krishnan, S Yingling, ... Plant and Animal Genome XXVII Conference (January 12-16, 2019), 2019 | | 2019 |
