עקוב אחר
Javier Vargas
Javier Vargas
Optics Department, Universidad Complutense de Madrid
כתובת אימייל מאומתת בדומיין ucm.es - דף הבית
כותרת
צוטט על ידי
צוטט על ידי
שנה
DeepEMhancer: a deep learning solution for cryo-EM volume post-processing‏
R Sanchez-Garcia, J Gomez-Blanco, A Cuervo, JM Carazo, COS Sorzano, ...‏
Communications biology 4 (1), 874, 2021‏
8882021
Scipion: A software framework toward integration, reproducibility and validation in 3D electron microscopy‏
JM De la Rosa-Trevin, A Quintana, L Del Cano, A Zaldívar, I Foche, ...‏
Journal of structural biology 195 (1), 93-99, 2016‏
5652016
A survey of dimensionality reduction techniques‏
COS Sorzano, J Vargas, AP Montano‏
arXiv preprint arXiv:1403.2877, 2014‏
5572014
Xmipp 3.0: an improved software suite for image processing in electron microscopy‏
JM De la Rosa-Trevín, J Otón, R Marabini, A Zaldívar, J Vargas, ...‏
Journal of structural biology 184 (2), 321-328, 2013‏
3332013
Phase-shifting interferometry based on principal component analysis‏
J Vargas, JA Quiroga, T Belenguer‏
Optics letters 36 (8), 1326-1328, 2011‏
2562011
MonoRes: automatic and accurate estimation of local resolution for electron microscopy maps‏
JL Vilas, J Gómez-Blanco, P Conesa, R Melero, JM de la Rosa-Trevín, ...‏
Structure 26 (2), 337-344. e4, 2018‏
2332018
Two-step demodulation based on the Gram–Schmidt orthonormalization method‏
J Vargas, JA Quiroga, COS Sorzano, JC Estrada, JM Carazo‏
Optics letters 37 (3), 443-445, 2012‏
2012012
Asymmetric cryo-EM reconstruction of phage MS2 reveals genome structure in situ‏
RI Koning, J Gomez-Blanco, I Akopjana, J Vargas, A Kazaks, K Tars, ...‏
Nature communications 7 (1), 12524, 2016‏
1502016
Two-step interferometry by a regularized optical flow algorithm‏
J Vargas, JA Quiroga, COS Sorzano, JC Estrada, JM Carazo‏
Optics letters 36 (17), 3485-3487, 2011‏
1502011
Automatic local resolution-based sharpening of cryo-EM maps‏
E Ramírez-Aportela, JL Vilas, A Glukhova, R Melero, P Conesa, ...‏
Bioinformatics 36 (3), 765-772, 2020‏
1372020
Analysis of the principal component algorithm in phase-shifting interferometry‏
J Vargas, JA Quiroga, T Belenguer‏
Optics letters 36 (12), 2215-2217, 2011‏
1222011
Separating actin-dependent chemokine receptor nanoclustering from dimerization indicates a role for clustering in CXCR4 signaling and function‏
L Martínez-Muñoz, JM Rodríguez-Frade, R Barroso, CÓS Sorzano, ...‏
Molecular cell 70 (1), 106-119. e10, 2018‏
962018
Local computational methods to improve the interpretability and analysis of cryo-EM maps‏
S Kaur, J Gomez-Blanco, AAZ Khalifa, S Adinarayanan, ...‏
Nature communications 12 (1), 1240, 2021‏
952021
A pattern matching approach to the automatic selection of particles from low-contrast electron micrographs‏
V Abrishami, A Zaldívar-Peraza, JM de la Rosa-Trevín, J Vargas, J Otón, ...‏
Bioinformatics 29 (19), 2460-2468, 2013‏
882013
DeepEMhancer: a deep learning solution for cryo-EM volume post-processing. Commun. Biol. 4, 874‏
R Sanchez-Garcia, J Gomez-Blanco, A Cuervo, JM Carazo, COS Sorzano, ...‏
832021
Two-step self-tuning phase-shifting interferometry‏
J Vargas, JA Quiroga, T Belenguer, M Servín, JC Estrada‏
Optics express 19 (2), 638-648, 2011‏
782011
Alignment of direct detection device micrographs using a robust Optical Flow approach‏
V Abrishami, J Vargas, X Li, Y Cheng, R Marabini, CÓS Sorzano, ...‏
Journal of structural biology 189 (3), 163-176, 2015‏
762015
Efficient initial volume determination from electron microscopy images of single particles‏
J Vargas, AL Alvarez-Cabrera, R Marabini, JM Carazo, COS Sorzano‏
Bioinformatics 30 (20), 2891-2898, 2014‏
762014
Fast two-dimensional simultaneous phase unwrapping and low-pass filtering‏
MA Navarro, JC Estrada, M Servin, JA Quiroga, J Vargas‏
Optics express 20 (3), 2556-2561, 2012‏
732012
Spatial carrier phase-shifting algorithm based on principal component analysis method‏
Y Du, G Feng, H Li, J Vargas, S Zhou‏
Optics Express 20 (15), 16471-16479, 2012‏
722012
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מאמרים 1–20