| Untangling introductions and persistence in COVID-19 resurgence in Europe P Lemey, N Ruktanonchai, SL Hong, V Colizza, C Poletto, ... Nature 595 (7869), 713-717, 2021 | 153* | 2021 |
| Accommodating individual travel history and unsampled diversity in Bayesian phylogeographic inference of SARS-CoV-2 P Lemey, SL Hong, V Hill, G Baele, C Poletto, V Colizza, Á O’toole, ... Nature communications 11 (1), 5110, 2020 | 153* | 2020 |
| Salmonella enterica Serotype 4,[5],12:i:- in Swine in the United States Midwest: An Emerging Multidrug-Resistant Clade E Elnekave, S Hong, AE Mather, D Boxrud, AJ Taylor, V Lappi, ... Clinical Infectious Diseases 66 (6), 877-885, 2018 | 110 | 2018 |
| A phylodynamic workflow to rapidly gain insights into the dispersal history and dynamics of SARS-CoV-2 lineages S Dellicour, K Durkin, SL Hong, B Vanmechelen, J Martí-Carreras, MS Gill, ... Molecular biology and evolution 38 (4), 1608-1613, 2021 | 95 | 2021 |
| Serotypes and Antimicrobial Resistance in Salmonella enterica Recovered from Clinical Samples from Cattle and Swine in Minnesota, 2006 to 2015 S Hong, A Rovira, P Davies, C Ahlstrom, P Muellner, A Rendahl, K Olsen, ... PloS one 11 (12), e0168016, 2016 | 79 | 2016 |
| Emergence and spread of SARS-CoV-2 lineage B. 1.620 with variant of concern-like mutations and deletions G Dudas, SL Hong, BI Potter, S Calvignac-Spencer, FS Niatou-Singa, ... Nature communications 12 (1), 5769, 2021 | 74 | 2021 |
| Genomic sequencing of SARS-CoV-2 in Rwanda reveals the importance of incoming travelers on lineage diversity Y Butera, E Mukantwari, M Artesi, J Umuringa, ÁN O’Toole, V Hill, ... Nature communications 12 (1), 5705, 2021 | 36* | 2021 |
| Genetic determinants of resistance to extended-spectrum cephalosporin and fluoroquinolone in Escherichia coli isolated from diseased pigs in the United States SS Hayer, S Lim, S Hong, E Elnekave, T Johnson, A Rovira, F Vannucci, ... Msphere 5 (5), 10.1128/msphere. 00990-20, 2020 | 26 | 2020 |
| Snapshot of the evolution and mutation patterns of SARS-CoV-2 J Zhao, J Sun, WT He, X Ji, Q Gao, X Zhai, MA Suchard, SL Hong, ... BioRxiv, 2020.07. 04.187435, 2020 | 26 | 2020 |
| Dispersal dynamics of SARS-CoV-2 lineages during the first epidemic wave in New York City S Dellicour, SL Hong, B Vrancken, A Chaillon, MS Gill, MT Maurano, ... PLoS Pathogens 17 (5), e1009571, 2021 | 25 | 2021 |
| Antibody escape and global spread of SARS-CoV-2 lineage A. 27 T Kaleta, L Kern, SL Hong, M Hölzer, G Kochs, J Beer, D Schnepf, ... Nature communications 13 (1), 1152, 2022 | 24 | 2022 |
| Global spatial dynamics and vaccine-induced fitness changes of Bordetella pertussis N Lefrancq, V Bouchez, N Fernandes, AM Barkoff, T Bosch, T Dalby, ... Science translational medicine 14 (642), eabn3253, 2022 | 23 | 2022 |
| Circulation of Plasmids Harboring Resistance Genes to Quinolones and/or Extended-Spectrum Cephalosporins in Multiple Salmonella enterica Serotypes from … E Elnekave, SL Hong, S Lim, SS Hayer, D Boxrud, AJ Taylor, V Lappi, ... Antimicrobial agents and chemotherapy 63 (4), 10.1128/aac. 02602-18, 2019 | 23 | 2019 |
| Transmission of multidrug-resistant salmonella enterica subspecies enterica 4,[5], 12: i:-Sequence type 34 between europe and the United States E Elnekave, SL Hong, S Lim, D Boxrud, A Rovira, AE Mather, A Perez, ... Emerging infectious diseases 26 (12), 3034, 2020 | 22 | 2020 |
| Comparing serotyping with whole-genome sequencing for subtyping of non-typhoidal Salmonella enterica: a large-scale analysis of 37 serotypes with a public … E Elnekave, SL Hong, S Lim, TJ Johnson, A Perez, J Alvarez Microbial genomics 6 (9), e000425, 2020 | 20 | 2020 |
| Bayesian phylogeographic analysis incorporating predictors and individual travel histories in BEAST SL Hong, P Lemey, MA Suchard, G Baele Current protocols 1 (4), e98, 2021 | 17 | 2021 |
| In search of covariates of HIV-1 subtype B spread in the United States—a cautionary tale of large-scale Bayesian phylogeography SL Hong, S Dellicour, B Vrancken, MA Suchard, MT Pyne, DR Hillyard, ... Viruses 12 (2), 182, 2020 | 17 | 2020 |
| Exploiting genomic surveillance to map the spatio-temporal dispersal of SARS-CoV-2 spike mutations in Belgium across 2020 N Bollen, M Artesi, K Durkin, SL Hong, B Potter, B Boujemla, ... Scientific reports 11 (1), 18580, 2021 | 14 | 2021 |
| The phylodynamics of SARS-CoV-2 during 2020 in Finland P Truong Nguyen, R Kant, F Van den Broeck, MT Suvanto, H Alburkat, ... Communications medicine 2 (1), 65, 2022 | 11* | 2022 |
| Delta-Omicron recombinant SARS-CoV-2 in a transplant patient treated with Sotrovimab R Duerr, H Zhou, T Tada, D Dimartino, C Marier, P Zappile, G Wang, ... | 11 | 2022 |
Guy BaeleAssociate Professor, KU LeuvenVerified email at kuleuven.be
