Alex K. Shalek
Title
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Cited by
Year
Highly parallel genome-wide expression profiling of individual cells using nanoliter droplets
EZ Macosko, A Basu, R Satija, J Nemesh, K Shekhar, M Goldman, I Tirosh, ...
Cell 161 (5), 1202-1214, 2015
34752015
Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma
AP Patel, I Tirosh, JJ Trombetta, AK Shalek, SM Gillespie, H Wakimoto, ...
Science 344 (6190), 1396-1401, 2014
23312014
Dissecting the multicellular ecosystem of metastatic melanoma by single-cell RNA-seq
I Tirosh, B Izar, SM Prakadan, MH Wadsworth, D Treacy, JJ Trombetta, ...
Science 352 (6282), 189-196, 2016
15962016
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
AK Shalek, R Satija, X Adiconis, RS Gertner, JT Gaublomme, ...
Nature 498 (7453), 236-240, 2013
10242013
Science forum: the human cell atlas
A Regev, SA Teichmann, ES Lander, I Amit, C Benoist, E Birney, ...
Elife 6, e27041, 2017
8162017
MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data
G Finak, A McDavid, M Yajima, J Deng, V Gersuk, AK Shalek, CK Slichter, ...
Genome biology 16 (1), 1-13, 2015
7292015
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
AK Shalek, R Satija, J Shuga, JJ Trombetta, D Gennert, D Lu, P Chen, ...
Nature 510 (7505), 363-369, 2014
7262014
SARS-CoV-2 receptor ACE2 is an interferon-stimulated gene in human airway epithelial cells and is detected in specific cell subsets across tissues
CGK Ziegler, SJ Allon, SK Nyquist, IM Mbano, VN Miao, CN Tzouanas, ...
Cell 181 (5), 1016-1035. e19, 2020
7192020
Reconstructing and reprogramming the tumor-propagating potential of glioblastoma stem-like cells
ML Suvā, E Rheinbay, SM Gillespie, AP Patel, H Wakimoto, SD Rabkin, ...
Cell 157 (3), 580-594, 2014
6012014
Dynamic regulatory network controlling TH 17 cell differentiation
N Yosef, AK Shalek, JT Gaublomme, H Jin, Y Lee, A Awasthi, C Wu, ...
Nature 496 (7446), 461-468, 2013
5622013
Vertical silicon nanowires as a universal platform for delivering biomolecules into living cells
AK Shalek, JT Robinson, ES Karp, JS Lee, DR Ahn, MH Yoon, A Sutton, ...
Proceedings of the National Academy of Sciences 107 (5), 1870-1875, 2010
5072010
Whole-exome sequencing of circulating tumor cells provides a window into metastatic prostate cancer
JG Lohr, VA Adalsteinsson, K Cibulskis, AD Choudhury, M Rosenberg, ...
Nature biotechnology 32 (5), 479, 2014
4832014
Vertical nanowire electrode arrays as a scalable platform for intracellular interfacing to neuronal circuits
JT Robinson, M Jorgolli, AK Shalek, MH Yoon, RS Gertner, H Park
Nature nanotechnology 7 (3), 180-184, 2012
4562012
Seq-Well: portable, low-cost RNA sequencing of single cells at high throughput
TM Gierahn, MH Wadsworth, TK Hughes, BD Bryson, A Butler, R Satija, ...
Nature methods 14 (4), 395-398, 2017
3852017
Transcriptional and epigenetic dynamics during specification of human embryonic stem cells
CA Gifford, MJ Ziller, H Gu, C Trapnell, J Donaghey, A Tsankov, ...
Cell 153 (5), 1149-1163, 2013
3682013
Single-cell genomics unveils critical regulators of Th17 cell pathogenicity
JT Gaublomme, N Yosef, Y Lee, RS Gertner, LV Yang, C Wu, PP Pandolfi, ...
Cell 163 (6), 1400-1412, 2015
3502015
Deconstructing transcriptional heterogeneity in pluripotent stem cells
RM Kumar, P Cahan, AK Shalek, R Satija, AJ DaleyKeyser, H Li, J Zhang, ...
Nature 516 (7529), 56-61, 2014
3152014
A cancer cell program promotes T cell exclusion and resistance to checkpoint blockade
L Jerby-Arnon, P Shah, MS Cuoco, C Rodman, MJ Su, JC Melms, ...
Cell 175 (4), 984-997. e24, 2018
3082018
In vivo imaging of neural activity
W Yang, R Yuste
Nature methods 14 (4), 349-359, 2017
2342017
Pathogen cell-to-cell variability drives heterogeneity in host immune responses
R Avraham, N Haseley, D Brown, C Penaranda, HB Jijon, JJ Trombetta, ...
Cell 162 (6), 1309-1321, 2015
1872015
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