Jim Procter
Jim Procter
College of Life Sciences, University of Dundee.
Verified email at dundee.ac.uk
Title
Cited by
Cited by
Year
Jalview Version 2—a multiple sequence alignment editor and analysis workbench
AM Waterhouse, JB Procter, DMA Martin, M Clamp, GJ Barton
Bioinformatics 25 (9), 1189-1191, 2009
65422009
JPred4: a protein secondary structure prediction server
A Drozdetskiy, C Cole, J Procter, GJ Barton
Nucleic acids research 43 (W1), W389-W394, 2015
12572015
Visualizing biological data—now and in the future
SI O'Donoghue, AC Gavin, N Gehlenborg, DS Goodsell, JK Hériché, ...
Nature methods 7 (3), S2-S4, 2010
1602010
Phosphoproteomic screening identifies Rab GTP ases as novel downstream targets of PINK 1
YC Lai, C Kondapalli, R Lehneck, JB Procter, BD Dill, HI Woodroof, ...
The EMBO journal 34 (22), 2840-2861, 2015
1282015
Ten simple rules for the open development of scientific software
A Prlić, JB Procter
PLoS Comput Biol 8 (12), e1002802, 2012
1262012
MSAViewer: interactive JavaScript visualization of multiple sequence alignments
G Yachdav, S Wilzbach, B Rauscher, R Sheridan, I Sillitoe, J Procter, ...
Bioinformatics 32 (22), 3501-3503, 2016
1252016
Distinct donor and acceptor specificities of Trypanosoma brucei oligosaccharyltransferases
L Izquierdo, BL Schulz, JA Rodrigues, MLS Güther, JB Procter, GJ Barton, ...
The EMBO journal 28 (17), 2650-2661, 2009
1072009
Visualization of multiple alignments, phylogenies and gene family evolution
JB Procter, J Thompson, I Letunic, C Creevey, F Jossinet, GJ Barton
Nature methods 7 (3s), S16, 2010
982010
Java bioinformatics analysis web services for multiple sequence alignment—JABAWS: MSA
PV Troshin, JB Procter, GJ Barton
Bioinformatics 27 (14), 2001-2002, 2011
742011
MACSIMS: multiple alignment of complete sequences information management system
JD Thompson, A Muller, A Waterhouse, J Procter, GJ Barton, F Plewniak, ...
BMC bioinformatics 7 (1), 1-13, 2006
612006
Wurst: a protein threading server with a structural scoring function, sequence profiles and optimized substitution matrices
AE Torda, JB Procter, T Huber
Nucleic acids research 32 (suppl_2), W532-W535, 2004
612004
Visualization of biomedical data
SI O'Donoghue, BF Baldi, SJ Clark, AE Darling, JM Hogan, S Kaur, ...
Annual Review of Biomedical Data Science 1, 275-304, 2018
332018
Functional analysis of the methylmalonyl‐CoA epimerase from Caenorhabditis elegans
J Kühnl, T Bobik, JB Procter, C Burmeister, J Höppner, I Wilde, K Lüersen, ...
The FEBS journal 272 (6), 1465-1477, 2005
312005
JABAWS 2.2 distributed web services for Bioinformatics: protein disorder, conservation and RNA secondary structure
PV Troshin, JB Procter, A Sherstnev, DL Barton, F Madeira, GJ Barton
Bioinformatics 34 (11), 1939-1940, 2018
92018
The Dundee resource for sequence analysis and structure prediction
SA MacGowan, F Madeira, T Britto‐Borges, M Warowny, A Drozdetskiy, ...
Protein Science 29 (1), 277-297, 2020
72020
Alignment of Biological Sequences with Jalview
JB Procter, GM Carstairs, B Soares, K Mourão, TC Ofoegbu, D Barton, ...
Multiple Sequence Alignment, 203-224, 2021
62021
Problem solving environments: Extending the role of visualization systems
H Wright, K Brodlie, J Wood, J Procter
European Conference on Parallel Processing, 1323-1331, 2000
62000
Jalview: visualization and analysis of molecular sequences, alignments, and structures
A Waterhouse, J Procter, DA Martin, GJ Barton
BMC Bioinformatics 6 (3), 1-1, 2005
52005
SARS-CoV-2 structural coverage map reveals state changes that disrupt host immunity
SI O’Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, BK Ho, ...
bioRxiv, 2020
32020
Systematic modeling of SARS-CoV-2 protein structures
SI O'Donoghue, A Schafferhans, N Sikta, C Stolte, S Kaur, B Ho, ...
bioRxiv, 2020
32020
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Articles 1–20