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José S. L. Patané
José S. L. Patané
Bioinformatician - Lab. Especial de Ciclo Celular, Instituto Butantan
Verified email at butantan.gov.br
Title
Cited by
Cited by
Year
Best practices for justifying fossil calibrations
JF Parham, PCJ Donoghue, CJ Bell, TD Calway, JJ Head, PA Holroyd, ...
Systematic Biology 61 (2), 346-359, 2012
6602012
Exploring the genomic diversity of black yeasts and relatives (Chaetothyriales, Ascomycota)
MM Teixeira, LF Moreno, BJ Stielow, A Muszewska, M Hainaut, ...
Studies in mycology 86, 1-28, 2017
1702017
Phylogenomics of Xanthomonas field strains infecting pepper and tomato reveals diversity in effector repertoires and identifies determinants of host specificity
AR Schwartz, N Potnis, S Timilsina, M Wilson, J Patané, J Martins, ...
Frontiers in Microbiology 6, 144692, 2015
1562015
Worldwide Phylogenetic Distributions and Population Dynamics of the Genus Histoplasma
MM Teixeira, JSL Patané, ML Taylor, BL Gómez, RC Theodoro, ...
PLoS neglected tropical diseases 10 (6), e0004732, 2016
1222016
Temporal and spatial diversification of Pteroglossus araçaris (Aves: Ramphastidae) in the neotropics: constant rate of diversification does not support an increase in radiation …
S Patel, JD Weckstein, JSL Patané, JM Bates, A Aleixo
Molecular Phylogenetics and Evolution 58 (1), 105-115, 2011
822011
The fossil calibration database—a new resource for divergence dating
DT Ksepka, JF Parham, JF Allman, MJ Benton, MT Carrano, KA Cranston, ...
Systematic Biology 64 (5), 853-859, 2015
652015
Evolutionary history of Ramphastos toucans: molecular phylogenetics, temporal diversification, and biogeography
JSL Patané, JD Weckstein, A Aleixo, JM Bates
Molecular Phylogenetics and Evolution 53 (3), 923-934, 2009
632009
Genomic epidemiology of the SARS-CoV-2 epidemic in Brazil
M Giovanetti, SN Slavov, V Fonseca, E Wilkinson, H Tegally, JSL Patané, ...
Nature Microbiology 7 (9), 1490-1500, 2022
572022
Global distribution and evolution of Mycobacterium bovis lineages
CK Zimpel, JSL Patané, ACP Guedes, RF de Souza, TT Silva-Pereira, ...
Frontiers in microbiology 11, 509125, 2020
532020
Origin and diversification of Xanthomonas citri subsp. citri pathotypes revealed by inclusive phylogenomic, dating, and biogeographic analyses
JSL Patané, J Martins, LT Rangel, J Belasque, LA Digiampietri, ...
BMC genomics 20, 1-23, 2019
402019
Biogeography and spatio-temporal diversification of Selenidera and Andigena toucans (Aves: Ramphastidae)
HL Lutz, JD Weckstein, JSL Patané, JM Bates, A Aleixo
Molecular phylogenetics and evolution 69 (3), 873-883, 2013
392013
Identification and analysis of seven effector protein families with different adaptive and evolutionary histories in plant-associated members of the Xanthomonadaceae
RAB Assis, LC Polloni, JSL Patané, S Thakur, ÉB Felestrino, ...
Scientific reports 7 (1), 16133, 2017
372017
Biochemical, Transcriptomic and Proteomic Analyses of Digestion in the Scorpion Tityus serrulatus: Insights into Function and Evolution of Digestion in an Ancient …
FJ Fuzita, MWH Pinkse, JSL Patane, MA Juliano, PDEM Verhaert, ...
PloS one 10 (4), e0123841, 2015
352015
Nucleocapsid (N) gene mutations of SARS-CoV-2 can affect real-time RT-PCR diagnostic and impact false-negative results
JCC Lesbon, MD Poleti, EC de Mattos Oliveira, JSL Patané, LG Clemente, ...
Viruses 13 (12), 2474, 2021
322021
A novel Sporothrix brasiliensis genomic variant in Midwestern Brazil: evidence for an older and wider sporotrichosis epidemic
J Eudes Filho, IBD Santos, CMS Reis, JSL Patané, V Paredes, ...
Emerging microbes & infections 9 (1), 2515-2525, 2020
292020
Phylogenomics
JSL Patané, J Martins Jr., JC Setubal
Methods in Molecular Biology - Comparative Genomics 1704, 103-187, 2018
292018
Synthesizing and databasing fossil calibrations: divergence dating and beyond
DT Ksepka, MJ Benton, MT Carrano, MA Gandolfo, JJ Head, EJ Hermsen, ...
Biology Letters 7 (6), 801-803, 2011
292011
Genomic monitoring unveil the early detection of the SARS‐CoV‐2 B. 1.351 (beta) variant (20H/501Y. V2) in Brazil
SN Slavov, JSL Patané, RS Bezerra, M Giovanetti, V Fonseca, AJ Martins, ...
Journal of medical virology 93 (12), 6782-6787, 2021
272021
High throughput techniques to reveal the molecular physiology and evolution of digestion in spiders
FJ Fuzita, MWH Pinkse, JSL Patane, PDEM Verhaert, AR Lopes
BMC genomics 17, 1-19, 2016
272016
Genome-resolved metagenome and metatranscriptome analyses of thermophilic composting reveal key bacterial players and their metabolic interactions
LPP Braga, RV Pereira, LF Martins, LMS Moura, FB Sanchez, JSL Patané, ...
BMC genomics 22, 1-19, 2021
252021
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