| miR2Disease: a manually curated database for microRNA deregulation in human disease Q Jiang, Y Wang, Y Hao, L Juan, M Teng, X Zhang, M Li, G Wang, Y Liu Nucleic acids research 37 (suppl_1), D98-D104, 2009 | 1567 | 2009 |
| Expanded encyclopaedias of DNA elements in the human and mouse genomes JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ... Nature 583 (7818), 699-710, 2020 | 1155 | 2020 |
| Missing data and technical variability in single-cell RNA-sequencing experiments SC Hicks, FW Townes, M Teng, RA Irizarry Biostatistics, 2017 | 484 | 2017 |
| Prioritization of disease microRNAs through a human phenome-microRNAome network Q Jiang, Y Hao, G Wang, L Juan, T Zhang, M Teng, Y Liu, Y Wang BMC systems biology 4, 1-9, 2010 | 381 | 2010 |
| A practical guide to methods controlling false discoveries in computational biology K Korthauer, PK Kimes, C Duvallet, A Reyes, A Subramanian, M Teng, ... Genome biology 20, 1-21, 2019 | 267 | 2019 |
| SMARCB1 is required for widespread BAF complex–mediated activation of enhancers and bivalent promoters RT Nakayama, JL Pulice, AM Valencia, MJ McBride, ZM McKenzie, ... Nature genetics 49 (11), 1613-1623, 2017 | 258 | 2017 |
| A benchmark for RNA-seq quantification pipelines M Teng, MI Love, CA Davis, S Djebali, A Dobin, BR Graveley, S Li, ... Genome biology 17, 1-12, 2016 | 223 | 2016 |
| Alcohol alters DNA methylation patterns and inhibits neural stem cell differentiation FC Zhou, Y Balaraman, MX Teng, Y Liu, RP Singh, KP Nephew Alcoholism: Clinical and Experimental Research 35 (4), 735-746, 2011 | 179 | 2011 |
| Perspectives on ENCODE MP Snyder, TR Gingeras, JE Moore, Z Weng, MB Gerstein, B Ren, ... Nature 583 (7818), 693-698, 2020 | 91 | 2020 |
| On the widespread and critical impact of systematic bias and batch effects in single-cell RNA-Seq data SC Hicks, M Teng, RA Irizarry bioRxiv, 025528, 2015 | 89 | 2015 |
| Resistance to targeted therapies as a multifactorial, gradual adaptation to inhibitor specific selective pressures R Vander Velde, N Yoon, V Marusyk, A Durmaz, A Dhawan, ... Nature communications 11 (1), 2393, 2020 | 82 | 2020 |
| MYC controls the Epstein-Barr virus lytic switch R Guo, C Jiang, Y Zhang, A Govande, SJ Trudeau, F Chen, CJ Fry, R Puri, ... Molecular cell 78 (4), 653-669. e8, 2020 | 81 | 2020 |
| RNA sequencing analyses of gene expression during Epstein-Barr virus infection of primary B lymphocytes C Wang, D Li, L Zhang, S Jiang, J Liang, Y Narita, I Hou, Q Zhong, ... Journal of virology 93 (13), 10.1128/jvi. 00226-19, 2019 | 75 | 2019 |
| Signal transducers and activators of transcription-1 (STAT1) regulates microRNA transcription in interferon γ-stimulated HeLa cells G Wang, Y Wang, M Teng, D Zhang, L Li, Y Liu PLoS One 5 (7), e11794, 2010 | 69 | 2010 |
| Accounting for GC-content bias reduces systematic errors and batch effects in ChIP-seq data M Teng, RA Irizarry Genome research 27 (11), 1930-1938, 2017 | 42 | 2017 |
| DNA methylation enzymes and PRC1 restrict B-cell Epstein–Barr virus oncoprotein expression R Guo, Y Zhang, M Teng, C Jiang, M Schineller, B Zhao, JG Doench, ... Nature microbiology 5 (8), 1051-1063, 2020 | 40 | 2020 |
| rHAT: fast alignment of noisy long reads with regional hashing B Liu, D Guan, M Teng, Y Wang Bioinformatics 32 (11), 1625-1631, 2016 | 39 | 2016 |
| A modulated empirical Bayes model for identifying topological and temporal estrogen receptor α regulatory networks in breast cancer C Shen, Y Huang, Y Liu, G Wang, Y Zhao, Z Wang, M Teng, Y Wang, ... BMC systems biology 5, 1-16, 2011 | 39 | 2011 |
| Primary effusion lymphoma enhancer connectome links super-enhancers to dependency factors C Wang, L Zhang, L Ke, W Ding, S Jiang, D Li, Y Narita, I Hou, J Liang, ... Nature communications 11 (1), 6318, 2020 | 28 | 2020 |
| CRISPR/Cas9 Screens Reveal Multiple Layers of B cell CD40 Regulation C Jiang, SJ Trudeau, TC Cheong, R Guo, M Teng, LW Wang, Z Wang, ... Cell Reports 28 (5), 1307-1322.e8, 2019 | 25 | 2019 |
