| Toward automatic rhodopsin modeling as a tool for high-throughput computational photobiology F Melaccio, M del Carmen Marín, A Valentini, F Montisci, S Rinaldi, ... Journal of chemical theory and computation 12 (12), 6020-6034, 2016 | 64 | 2016 |
| Red-shifting mutation of light-driven sodium-pump rhodopsin K Inoue, M del Carmen Marín, S Tomida, R Nakamura, Y Nakajima, ... Nature communications 10 (1), 1993, 2019 | 60 | 2019 |
| a-ARM: Automatic Rhodopsin Modeling with Chromophore Cavity Generation, Ionization State Selection, and External Counterion Placement L Pedraza-González, L De Vico, MC Marı́n, F Fanelli, M Olivucci Journal of chemical theory and computation 15 (5), 3134-3152, 2019 | 43 | 2019 |
| Fluorescence enhancement of a microbial rhodopsin via electronic reprogramming MC Marín, D Agathangelou, Y Orozco-Gonzalez, A Valentini, Y Kato, ... Journal of the American Chemical Society 141 (1), 262-271, 2018 | 41 | 2018 |
| An average solvent electrostatic configuration protocol for Qm/mm free energy optimization: Implementation and application to rhodopsin systems Y Orozco-Gonzalez, M Manathunga, MDC Marín, D Agathangelou, ... Journal of chemical theory and computation 13 (12), 6391-6404, 2017 | 35 | 2017 |
| Effect of point mutations on the ultrafast photo-isomerization of Anabaena sensory rhodopsin D Agathangelou, Y Orozco-Gonzalez, M del Carmen Marín, PP Roy, ... Faraday discussions 207, 55-75, 2018 | 17 | 2018 |
| Assessment of MC-PDFT excitation energies for a set of QM/MM models of rhodopsins MC Marín, L De Vico, SS Dong, L Gagliardi, DG Truhlar, M Olivucci Journal of chemical theory and computation 15 (3), 1915-1923, 2019 | 16 | 2019 |
| Web-ARM: A Web-Based Interface for the Automatic Construction of QM/MM Models of Rhodopsins L Pedraza-González, MDC Marin, AN Jorge, TD Ruck, X Yang, ... Journal of Chemical Information and Modeling 60 (3), 1481-1493, 2020 | 15 | 2020 |
| Systematic excited state studies of reversibly switchable fluorescent proteins D Smyrnova, MDC Marín, M Olivucci, A Ceulemans Journal of chemical theory and computation 14 (6), 3163-3172, 2018 | 10 | 2018 |
| Electrochemical behavior of hybrid carbon nanomaterials: the chemistry behind electrochemistry M Moreno-Guzman, A Martín, M del Carmen Marín, T Sierra, ... Electrochimica Acta 214, 286-294, 2016 | 10 | 2016 |
| Sub-picosecond CC bond photo-isomerization: evidence for the role of excited state mixing D Agathangelou, PP Roy, M del Carmen Marín, N Ferré, M Olivucci, ... Comptes Rendus. Physique 22 (S2), 111-138, 2021 | 6 | 2021 |
| Structural characterization of proton-pumping rhodopsin lacking a cytoplasmic proton donor residue by X-ray crystallography K Suzuki, M del Carmen Marín, M Konno, R Bagherzadeh, T Murata, ... Journal of Biological Chemistry 298 (3), 2022 | 5 | 2022 |
| On the Automatic Construction of QM/MM Models for Biological Photoreceptors: Rhodopsins as Model Systems L Pedraza-González, M del Carmen Marín, L De Vico, X Yang, M Olivucci QM/MM Studies of Light-responsive Biological Systems, 1-75, 2020 | 4 | 2020 |
| Converting a Natural-Light-Driven Outward Proton Pump Rhodopsin into an Artificial Inward Proton Pump MC Marín, M Konno, H Yawo, K Inoue Journal of the American Chemical Society 145 (20), 10938-10942, 2023 | 2 | 2023 |
| Biophysical characterization of microbial rhodopsins with DSE motif M del Carmen Marín, AL Jaffe, PT West, M Konno, JF Banfield, K Inoue Biophysics and Physicobiology 20 (Supplemental), e201023, 2023 | 2 | 2023 |
| Multiple roles of a conserved glutamate residue for unique biophysical properties in a new group of microbial rhodopsins homologous to TAT rhodopsin K Mannen, T Nagata, A Rozenberg, M Konno, M del Carmen Marín, ... Journal of Molecular Biology, 168331, 2023 | 1 | 2023 |
| On excited state reaction path in reversibly switchable fluorescent proteins D Smyrnova, MC Marín, M Olivucci, A Ceulemans arXiv preprint arXiv:1709.06911, 2017 | 1 | 2017 |
| Structural characterization of a synthetic mimic of the Photoactive Yellow Protein G Tassone, C Pozzi, M Paolino, M Orlandini, M del Carmen Marín, ... | | 2019 |
| Anabaena Sensory Rhodopsin: Effect of point mutations on PSBR photo-isomerization speed D Agathangelou, Y Orozco-Gonzalez, MCM Pérez, J Brazard, H Kandori, ... EPJ Web Conf. 205, 10004, 2019 | | 2019 |
| Towards the computational design of highly fluorescent rhodopsins A Valentini, MC Marin, Y Orozco, M Riccardi, M Olivucci ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 256, 2018 | | 2018 |
Yoelvis Orozco GonzalezFathom.fmVerified email at alumni.usp.br
