| Tracking a Hospital Outbreak of Carbapenem-Resistant Klebsiella pneumoniae with Whole-Genome Sequencing ES Snitkin, AM Zelazny, PJ Thomas, F Stock, ... Science translational medicine 4 (148), 148ra116-148ra116, 2012 | 1027* | 2012 |
| Single-molecule sequencing to track plasmid diversity of hospital-associated carbapenemase-producing Enterobacteriaceae S Conlan, PJ Thomas, C Deming, M Park, AF Lau, JP Dekker, ES Snitkin, ... Science translational medicine 6 (254), 254ra126-254ra126, 2014 | 345 | 2014 |
| Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network B Linghu, ES Snitkin, Z Hu, Y Xia, C DeLisi Genome biology 10, 1-17, 2009 | 261 | 2009 |
| Longitudinal shift in diabetic wound microbiota correlates with prolonged skin defense response EA Grice, ES Snitkin, LJ Yockey, DM Bermudez, ... Proceedings of the National Academy of Sciences 107 (33), 14799-14804, 2010 | 232 | 2010 |
| Genome-wide recombination drives diversification of epidemic strains of Acinetobacter baumannii ES Snitkin, AM Zelazny, CI Montero, F Stock, L Mijares, ... Proceedings of the National Academy of Sciences 108 (33), 13758-13763, 2011 | 193* | 2011 |
| Towards the identification of essential genes using targeted genome sequencing and comparative analysis AM Gustafson, ES Snitkin, SCJ Parker, C DeLisi, S Kasif Bmc Genomics 7, 1-16, 2006 | 161 | 2006 |
| VisANT: an integrative framework for networks in systems biology Z Hu, ES Snitkin, C DeLisi Briefings in bioinformatics 9 (4), 317-325, 2008 | 144 | 2008 |
| Genomic insights into the fate of colistin resistance and Acinetobacter baumannii during patient treatment ES Snitkin, AM Zelazny, J Gupta, TN Palmore, PR Murray, JA Segre, ... Genome research 23 (7), 1155-1162, 2013 | 120 | 2013 |
| Rapid Growth of Uropathogenic Escherichia coli during Human Urinary Tract Infection VS Forsyth, CE Armbruster, SN Smith, A Pirani, AC Springman, ... MBio 9 (2), 10.1128/mbio. 00186-18, 2018 | 109 | 2018 |
| Phase-variable capsular polysaccharides and lipoproteins modify bacteriophage susceptibility in Bacteroides thetaiotaomicron NT Porter, AJ Hryckowian, BD Merrill, JJ Fuentes, JO Gardner, ... Nature microbiology 5 (9), 1170-1181, 2020 | 93 | 2020 |
| Metabolic network model of a human oral pathogen V Mazumdar, ES Snitkin, S Amar, D Segre Journal of bacteriology 191 (1), 74-90, 2009 | 90 | 2009 |
| Model-driven analysis of experimentally determined growth phenotypes for 465 yeast gene deletion mutants under 16 different conditions ES Snitkin, AM Dudley, DM Janse, K Wong, GM Church, D Segrč Genome biology 9, 1-18, 2008 | 73 | 2008 |
| Network of microbial and antibiotic interactions drive colonization and infection with multidrug-resistant organisms J Wang, B Foxman, L Mody, ES Snitkin Proceedings of the National Academy of Sciences 114 (39), 10467-10472, 2017 | 71 | 2017 |
| Epistatic interaction maps relative to multiple metabolic phenotypes ES Snitkin, D Segrč PLoS genetics 7 (2), e1001294, 2011 | 71 | 2011 |
| Comparative assessment of performance and genome dependence among phylogenetic profiling methods ES Snitkin, AM Gustafson, J Mellor, J Wu, C DeLisi BMC bioinformatics 7, 1-11, 2006 | 69 | 2006 |
| Integrated genomic and interfacility patient-transfer data reveal the transmission pathways of multidrug-resistant Klebsiella pneumoniae in a regional outbreak ES Snitkin, S Won, A Pirani, Z Lapp, RA Weinstein, K Lolans, MK Hayden Science translational medicine 9 (417), eaan0093, 2017 | 55 | 2017 |
| TSG-6 protein binding to glycosaminoglycans: formation of stable complexes with hyaluronan and binding to chondroitin sulfates HG Wisniewski, ES Snitkin, C Mindrescu, MH Sweet, J Vilcek Journal of Biological Chemistry 280 (15), 14476-14484, 2005 | 49 | 2005 |
| Forest and trees: exploring bacterial virulence with genome-wide association studies and machine learning JP Allen, E Snitkin, NB Pincus, AR Hauser Trends in microbiology 29 (7), 621-633, 2021 | 46 | 2021 |
| Genetically diverse uropathogenic Escherichia coli adopt a common transcriptional program in patients with UTIs A Sintsova, AE Frick-Cheng, S Smith, A Pirani, S Subashchandrabose, ... Elife 8, e49748, 2019 | 46 | 2019 |
| Whole genome sequencing—implications for infection prevention and outbreak investigations KJ Popovich, ES Snitkin Current infectious disease reports 19, 1-7, 2017 | 46 | 2017 |
Stephen C.J. ParkerAssociate Professor, Computational Medicine & Bioinformatics, Human Genetics, BiostatisticsVerified email at umich.edu
