Douglas E. Smith

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Steven ChuProf.Verified email at stanford.edu
Thomas T. PerkinsFellow, JILAVerified email at jila.colorado.edu
Nicholas KellerDept. of Physics, University of California, San DiegoVerified email at physics.ucsd.edu
J. Peter RickgauerPostdoctoral Research Scientist, HHMI JaneliaVerified email at janelia.hhmi.org
Ronald LarsonUniversity of MichiganVerified email at umich.edu
PJ JardineUniversity of MinnesotaVerified email at umn.edu
Carlos Jose BustamanteUniversity of California, BerkeleyVerified email at alice.berkeley.edu
michael feissProfessor Emeritus of Microbiology, Univ. of IowaVerified email at uiowa.edu
Gaurav AryaDuke UniversityVerified email at duke.edu
Venigalla RaoThe Catholic University of AmericaVerified email at cua.edu
Sander J. TansAMOLF institute Amsterdam, Delft University of TechnologyVerified email at amolf.nl
Rachel MillinNeuroscience Graduate Program, University of Southern CaliforniaVerified email at usc.edu
Jan LiphardtAssociate Professor of BioengineeringVerified email at stanford.edu
Mariam OrdyanSalk Institute for Biological Studies, UCSDVerified email at physics.ucsd.edu
Zachary BerndsenUniversity of Missouri ColumbiaVerified email at missouri.edu
James T KadonagaUCSDVerified email at ucsd.edu
David J. OrtizUniversity of WashingtonVerified email at uw.edu
Vishal KottadielUniversity of Illinois, Urbana-ChampaignVerified email at illinois.edu
James TsayVerified email at illumina.com
Joshua PajakUniversity of Massachusetts Medical SchoolVerified email at umassmed.edu

Douglas E. Smith

Professor, UC San Diego

Verified email at ucsd.edu - Homepage

Biophysics Polymer Physics Optical Tweezers Molecular Motors Single Molecules


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The bacteriophage phi29 portal motor can package DNA against a large internal force DE Smith, SJ Tans, SB Smith, S Grimes, DL Anderson, C Bustamante Nature 413 (6857), 748-752, 2001	1278	2001
Single-molecule studies of DNA mechanics C Bustamante, SB Smith, J Liphardt, D Smith Current Opinion in Structural Biology 10 (3), 279-285, 2000	1177	2000
Single polymer dynamics in an elongational flow TT Perkins, DE Smith, S Chu Science 276 (5321), 2016-2021, 1997	1153	1997
Single-polymer dynamics in steady shear flow DE Smith, HP Babcock, S Chu Science 283 (5408), 1724-1727, 1999	998	1999
Relaxation of a single DNA molecule observed by optical microscopy TT Perkins, SR Quake, DE Smith, S Chu Science 264 (5160), 822-826, 1994	943	1994
Stretching of a single tethered polymer in a uniform flow TT Perkins, DE Smith, RG Larson, S Chu Science, 83-83, 1995	787	1995
Direct observation of tube-like motion of a single polymer chain TT Perkins, DE Smith, S Chu Science 264 (5160), 819-822, 1994	684	1994
Response of flexible polymers to a sudden elongational flow DE Smith, S Chu Science 281 (5381), 1335-1340, 1998	565	1998
Dynamical scaling of DNA diffusion coefficients DE Smith, TT Perkins, S Chu Macromolecules 29 (4), 1372-1373, 1996	396	1996
Diffusion of isolated DNA molecules: dependence on length and topology RM Robertson, S Laib, DE Smith Proceedings of the National Academy of Sciences 103 (19), 7310-7314, 2006	306	2006
Brownian dynamics simulations of a DNA molecule in an extensional flow field RG Larson, H Hu, DE Smith, S Chu Journal of Rheology (1978-present) 43 (2), 267-304, 1999	274	1999
Hydrodynamics of a DNA molecule in a flow field RG Larson, TT Perkins, DE Smith, S Chu Physical Review E 55 (2), 1794-1797, 1997	257	1997
Single phage T4 DNA packaging motors exhibit large force generation, high velocity, and dynamic variability DN Fuller, DM Raymer, VI Kottadiel, VB Rao, DE Smith Proceedings of the National Academy of Sciences 104 (43), 16868-16873, 2007	220	2007
Measurements of single DNA molecule packaging dynamics in bacteriophage λ reveal high forces, high motor processivity, and capsid transformations DN Fuller, DM Raymer, JP Rickgauer, RM Robertson, CE Catalano, ... Journal of Molecular Biology 373 (5), 1113-1122, 2007	195	2007
Dynamics of dilute and semidilute DNA solutions in the start-up of shear flow JS Hur, ESG Shaqfeh, HP Babcock, DE Smith, S Chu Journal of Rheology (1978-present) 45 (2), 421-450, 2001	188	2001
Ionic effects on viral DNA packaging and portal motor function in bacteriophage φ29 DN Fuller, JP Rickgauer, PJ Jardine, S Grimes, DL Anderson, DE Smith Proceedings of the National Academy of Sciences 104 (27), 11245-11250, 2007	177	2007
Portal Motor Velocity and Internal Force Resisting Viral DNA Packaging in Bacteriophage ϕ29 JP Rickgauer, DN Fuller, S Grimes, PJ Jardine, DL Anderson, DE Smith Biophysical journal 94 (1), 159-167, 2008	145	2008
Self-diffusion of an entangled DNA molecule by reptation DE Smith, TT Perkins, S Chu Physical review letters 75 (22), 4146, 1995	128	1995
Spontaneous knotting of an agitated string DM Raymer, DE Smith Proceedings of the National Academy of Sciences 104 (42), 16432-16437, 2007	127	2007
Strong effects of molecular topology on diffusion of entangled DNA molecules RM Robertson, DE Smith Proceedings of the National Academy of Sciences 104 (12), 4824-4827, 2007	123	2007

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