| Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment E Hodges, A Molaro, CO Dos Santos, P Thekkat, Q Song, PJ Uren, J Park, ... Molecular cell 44 (1), 17-28, 2011 | 335 | 2011 |
| Site identification in high-throughput RNA–protein interaction data PJ Uren, E Bahrami-Samani, SC Burns, M Qiao, FV Karginov, E Hodges, ... Bioinformatics 28 (23), 3013-3020, 2012 | 295 | 2012 |
| WTAP is a novel oncogenic protein in acute myeloid leukemia H Bansal, Q Yihua, SP Iyer, S Ganapathy, D Proia, LO Penalva, PJ Uren, ... Leukemia 28 (5), 1171-1174, 2014 | 240 | 2014 |
| Aberrant sperm DNA methylation predicts male fertility status and embryo quality KI Aston, PJ Uren, TG Jenkins, A Horsager, BR Cairns, AD Smith, ... Fertility and sterility 104 (6), 1388-1397. e5, 2015 | 199 | 2015 |
| Molecular hierarchy of mammary differentiation yields refined markers of mammary stem cells CO dos Santos, C Rebbeck, E Rozhkova, A Valentine, A Samuels, ... Proceedings of the National Academy of Sciences 110 (18), 7123-7130, 2013 | 114 | 2013 |
| Genomic analyses of the RNA-binding protein Hu antigen R (HuR) identify a complex network of target genes and novel characteristics of its binding sites PJ Uren, SC Burns, J Ruan, KK Singh, AD Smith, LOF Penalva Journal of Biological Chemistry 286 (43), 37063-37066, 2011 | 92 | 2011 |
| Riborex: fast and flexible identification of differential translation from Ribo-seq data W Li, W Wang, PJ Uren, LOF Penalva, AD Smith Bioinformatics 33 (11), 1735-1737, 2017 | 90 | 2017 |
| The RNA-binding protein Musashi1 affects medulloblastoma growth via a network of cancer-related genes and is an indicator of poor prognosis DT Vo, D Subramaniam, M Remke, TL Burton, PJ Uren, JA Gelfond, ... The American journal of pathology 181 (5), 1762-1772, 2012 | 87 | 2012 |
| IGF2BP3 modulates the interaction of invasion-associated transcripts with RISC H Ennajdaoui, JM Howard, T Sterne-Weiler, F Jahanbani, DJ Coyne, ... Cell reports 15 (9), 1876-1883, 2016 | 82 | 2016 |
| RNA-binding protein Musashi1 is a central regulator of adhesion pathways in glioblastoma PJ Uren, DT Vo, PR de Araujo, R Pötschke, SC Burns, E Bahrami-Samani, ... Molecular and cellular biology 35 (17), 2965-2978, 2015 | 64 | 2015 |
| High-throughput analyses of hnRNP H1 dissects its multi-functional aspect PJ Uren, E Bahrami-Samani, PR de Araujo, C Vogel, M Qiao, SC Burns, ... RNA biology 13 (4), 400-411, 2016 | 60 | 2016 |
| Genomic analyses reveal broad impact of miR-137 on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells S Tamim, DT Vo, PJ Uren, M Qiao, E Bindewald, WK Kasprzak, ... PloS one 9 (1), e85591, 2014 | 54 | 2014 |
| Musashi1 impacts radio-resistance in glioblastoma by controlling DNA-protein kinase catalytic subunit PR de Araujo, A Gorthi, AE da Silva, SS Tonapi, DT Vo, SC Burns, M Qiao, ... The American journal of pathology 186 (9), 2271-2278, 2016 | 47 | 2016 |
| RNA binding protein HuR regulates the expression of ABCA1 [S] CM Ramírez, CS Lin, K Abdelmohsen, L Goedeke, JH Yoon, ... Journal of lipid research 55 (6), 1066-1076, 2014 | 42 | 2014 |
| A profile of transcriptomic changes in the rd10 mouse model of retinitis pigmentosa PJ Uren, JT Lee, MM Doroudchi, AD Smith, A Horsager Molecular vision 20, 1612, 2014 | 39 | 2014 |
| Leveraging cross-link modification events in CLIP-seq for motif discovery E Bahrami-Samani, LOF Penalva, AD Smith, PJ Uren Nucleic acids research 43 (1), 95-103, 2015 | 37 | 2015 |
| A mouse model of targeted Musashi1 expression in whole intestinal epithelium suggests regulatory roles in cell cycle and stemness FM Cambuli, BR Correa, A Rezza, SC Burns, M Qiao, PJ Uren, E Kress, ... Stem cells 33 (12), 3621-3634, 2015 | 34 | 2015 |
| Computational challenges, tools, and resources for analyzing co‐and post‐transcriptional events in high throughput E Bahrami‐Samani, DT Vo, PR de Araujo, C Vogel, AD Smith, ... Wiley Interdisciplinary Reviews: RNA 6 (3), 291-310, 2015 | 16 | 2015 |
| Establishing a stable, repeatable platform for measuring changes in sperm DNA methylation M Abbasi, AD Smith, H Swaminathan, P Sangngern, A Douglas, ... Clinical epigenetics 10, 1-12, 2018 | 11 | 2018 |
| Promoter prediction using physico-chemical properties of DNA P Uren, RM Cameron-Jones, A Sale Computational Life Sciences II: Second International Symposium, CompLife …, 2006 | 11 | 2006 |
Andrew D SmithProfessor of Biological Sciences, University of Southern CaliforniaVerified email at smithlabresearch.org
