| Characterisation of the human uterine microbiome in non-pregnant women through deep sequencing of the V1-2 region of the 16S rRNA gene H Verstraelen, R Vilchez-Vargas, F Desimpel, R Jauregui, ... PeerJ 4, e1602, 2016 | 353 | 2016 |
| The active bacterial assemblages of the upper GI tract in individuals with and without Helicobacter infection C Schulz, K Schütte, N Koch, R Vilchez-Vargas, ML Wos-Oxley, ... Gut 67 (2), 216-225, 2018 | 185 | 2018 |
| Analysis of the microbial gene landscape and transcriptome for aromatic pollutants and alkane degradation using a novel internally calibrated microarray system R Vilchez‐Vargas, R Geffers, M Suárez‐Diez, I Conte, A Waliczek, ... Environmental Microbiology 15 (4), 1016-1039, 2013 | 168 | 2013 |
| Inoculum selection is crucial to ensure operational stability in anaerobic digestion J De Vrieze, S Gildemyn, R Vilchez-Vargas, R Jáuregui, DH Pieper, ... Applied microbiology and biotechnology 99, 189-199, 2015 | 141 | 2015 |
| Analysis of transcriptionally active bacteria throughout the gastrointestinal tract of healthy individuals R Vasapolli, K Schütte, C Schulz, M Vital, D Schomburg, DH Pieper, ... Gastroenterology 157 (4), 1081-1092. e3, 2019 | 132 | 2019 |
| A poke into the diversity and associations within human anterior nare microbial communities ML Wos-Oxley, I Plumeier, C Von Eiff, S Taudien, M Platzer, ... The ISME journal 4 (7), 839-851, 2010 | 132 | 2010 |
| Product diversity linked to substrate usage in chain elongation by mixed-culture fermentation M Coma, R Vilchez-Vargas, H Roume, R Jauregui, DH Pieper, K Rabaey Environmental science & technology 50 (12), 6467-6476, 2016 | 121 | 2016 |
| Ursodeoxycholic acid and its taurine-or glycine-conjugated species reduce colitogenic dysbiosis and equally suppress experimental colitis in mice L Van den Bossche, P Hindryckx, L Devisscher, S Devriese, ... Applied and environmental microbiology 83 (7), e02766-16, 2017 | 116 | 2017 |
| Metabolic networks, microbial ecology and ‘omics’ technologies: towards understanding in situ biodegradation processes R Vilchez‐Vargas, H Junca, DH Pieper Environmental Microbiology 12 (12), 3089-3104, 2010 | 110 | 2010 |
| High-resolution taxonomic profiling of the subgingival microbiome for biomarker discovery and periodontitis diagnosis SP Szafranski, ML Wos-Oxley, R Vilchez-Vargas, R Jáuregui, I Plumeier, ... Applied and environmental microbiology 81 (3), 1047-1058, 2015 | 99 | 2015 |
| Optimized cryopreservation of mixed microbial communities for conserved functionality and diversity FM Kerckhof, ENP Courtens, A Geirnaert, S Hoefman, A Ho, ... PloS one 9 (6), e99517, 2014 | 90 | 2014 |
| Altered microbiota diversity and bile acid signaling in cirrhotic and noncirrhotic NASH-HCC S Sydor, J Best, I Messerschmidt, P Manka, R Vilchez-Vargas, ... Clinical and translational gastroenterology 11 (3), e00131, 2020 | 88 | 2020 |
| Chronic rhinosinusitis with nasal polyps is characterized by dysbacteriosis of the nasal microbiota T Chalermwatanachai, R Vilchez-Vargas, G Holtappels, T Lacoere, ... Scientific reports 8 (1), 7926, 2018 | 83 | 2018 |
| Mineral and organic growing media have distinct community structure, stability and functionality in soilless culture systems O Grunert, E Hernandez-Sanabria, R Vilchez-Vargas, R Jauregui, ... Scientific reports 6 (1), 18837, 2016 | 83 | 2016 |
| The full-scale anaerobic digestion microbiome is represented by specific marker populations J De Vrieze, L Raport, H Roume, R Vilchez-Vargas, R Jáuregui, ... Water research 104, 101-110, 2016 | 77 | 2016 |
| In vitro colonisation of the distal colon by Akkermansia muciniphila is largely mucin and pH dependent F Van Herreweghen, P Van den Abbeele, T De Mulder, R De Weirdt, ... Beneficial microbes 8 (1), 81-96, 2017 | 76 | 2017 |
| Community structure, population dynamics and diversity of fungi in a full-scale membrane bioreactor (MBR) for urban wastewater treatment P Maza-Márquez, R Vilchez-Vargas, FM Kerckhof, E Aranda, ... Water Research 105, 507-519, 2016 | 75 | 2016 |
| High-rate activated sludge communities have a distinctly different structure compared to low-rate sludge communities, and are less sensitive towards environmental and … FA Meerburg, SE Vlaeminck, H Roume, D Seuntjens, DH Pieper, ... Water research 100, 137-145, 2016 | 75 | 2016 |
| Presence does not imply activity: DNA and RNA patterns differ in response to salt perturbation in anaerobic digestion J De Vrieze, L Regueiro, R Props, R Vilchez-Vargas, R Jáuregui, ... Biotechnology for biofuels 9, 1-13, 2016 | 72 | 2016 |
| Reinforcement of intestinal epithelial barrier by arabinoxylans in overweight and obese subjects: A randomized controlled trial: Arabinoxylans in gut barrier BN Salden, FJ Troost, E Wilms, P Truchado, R Vilchez-Vargas, DH Pieper, ... Clinical Nutrition 37 (2), 471-480, 2018 | 71 | 2018 |
Ruy JaureguiBioinformatics scientist, Ministry for Primary IndustriesVerified email at agresearch.co.nz
