| Deciphering microbial interactions and detecting keystone species with co-occurrence networks D Berry, S Widder Frontiers in Microbiology 5, 219, 2014 | 1387 | 2014 |
| High-fat diet alters gut microbiota physiology in mice H Daniel, AM Gholami, D Berry, C Desmarchelier, H Hahne, G Loh, ... The ISME journal 8 (2), 295-308, 2014 | 751 | 2014 |
| Barcoded primers used in multiplex amplicon pyrosequencing bias amplification D Berry, KB Mahfoudh, M Wagner, A Loy Applied and environmental microbiology 77 (21), 7846-7849, 2011 | 596 | 2011 |
| Microbial ecology of drinking water distribution systems D Berry, C Xi, L Raskin Current opinion in biotechnology 17 (3), 297-302, 2006 | 584 | 2006 |
| Pediatric obesity is associated with an altered gut microbiota and discordant shifts in Firmicutes populations A Riva, F Borgo, C Lassandro, E Verduci, G Morace, E Borghi, D Berry Environmental microbiology 19 (1), 95-105, 2017 | 465 | 2017 |
| Temporal bacterial community dynamics vary among ulcerative colitis patients after fecal microbiota transplantation S Angelberger, W Reinisch, A Makristathis, C Lichtenberger, C Dejaco, ... Official journal of the American College of Gastroenterology| ACG 108 (10 …, 2013 | 461 | 2013 |
| Tracking heavy water (D2O) incorporation for identifying and sorting active microbial cells D Berry, E Mader, TK Lee, D Woebken, Y Wang, D Zhu, M Palatinszky, ... Proceedings of the National Academy of Sciences 112 (2), E194-E203, 2015 | 452 | 2015 |
| Genome-guided design of a defined mouse microbiota that confers colonization resistance against Salmonella enterica serovar Typhimurium S Brugiroux, M Beutler, C Pfann, D Garzetti, HJ Ruscheweyh, D Ring, ... Nature microbiology 2 (2), 1-12, 2016 | 415 | 2016 |
| NxrB encoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite‐oxidizing Nitrospira M Pester, F Maixner, D Berry, T Rattei, H Koch, S Lücker, B Nowka, ... Environmental microbiology 16 (10), 3055-3071, 2014 | 373 | 2014 |
| Microbial nutrient niches in the gut FC Pereira, D Berry Environmental microbiology 19 (4), 1366-1378, 2017 | 348 | 2017 |
| Phylotype-level 16S rRNA analysis reveals new bacterial indicators of health state in acute murine colitis D Berry, C Schwab, G Milinovich, J Reichert, K Ben Mahfoudh, T Decker, ... The ISME journal 6 (11), 2091-2106, 2012 | 328 | 2012 |
| Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP T Gutierrez, DR Singleton, D Berry, T Yang, MD Aitken, A Teske The ISME journal 7 (11), 2091-2104, 2013 | 311 | 2013 |
| Cyanate as an energy source for nitrifiers M Palatinszky, C Herbold, N Jehmlich, M Pogoda, P Han, M von Bergen, ... Nature 524 (7563), 105-108, 2015 | 280 | 2015 |
| Mucispirillum schaedleri antagonizes Salmonella virulence to protect mice against colitis S Herp, S Brugiroux, D Garzetti, D Ring, LM Jochum, M Beutler, C Eberl, ... Cell host & microbe 25 (5), 681-694. e8, 2019 | 251 | 2019 |
| Host-compound foraging by intestinal microbiota revealed by single-cell stable isotope probing D Berry, B Stecher, A Schintlmeister, J Reichert, S Brugiroux, B Wild, ... Proceedings of the National Academy of Sciences 110 (12), 4720-4725, 2013 | 239 | 2013 |
| Rational design of a microbial consortium of mucosal sugar utilizers reduces Clostridiodes difficile colonization FC Pereira, K Wasmund, I Cobankovic, N Jehmlich, CW Herbold, KS Lee, ... Nature communications 11 (1), 5104, 2020 | 237 | 2020 |
| An automated Raman-based platform for the sorting of live cells by functional properties KS Lee, M Palatinszky, FC Pereira, J Nguyen, VI Fernandez, AJ Mueller, ... Nature microbiology 4 (6), 1035-1048, 2019 | 226 | 2019 |
| Longitudinal study of murine microbiota activity and interactions with the host during acute inflammation and recovery C Schwab, D Berry, I Rauch, I Rennisch, J Ramesmayer, E Hainzl, ... The ISME journal 8 (5), 1101-1114, 2014 | 207 | 2014 |
| Intestinal microbiota: a source of novel biomarkers in inflammatory bowel diseases? D Berry, W Reinisch Best practice & research Clinical gastroenterology 27 (1), 47-58, 2013 | 197 | 2013 |
| Lifestyle and horizontal gene transfer-mediated evolution of Mucispirillum schaedleri, a core member of the murine gut microbiota A Loy, C Pfann, M Steinberger, B Hanson, S Herp, S Brugiroux, ... Msystems 2 (1), 10.1128/msystems. 00171-16, 2017 | 174 | 2017 |
Alexander LoyProfessor for Microbial Communities, Centre for Microbiology & Environmental Systems ScienceVerified email at univie.ac.at
