Gene ontology: tool for the unification of biology M Ashburner, CA Ball, JA Blake, D Botstein, H Butler, JM Cherry, ... Nature genetics 25 (1), 25-29, 2000 | 32831 | 2000 |
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications T Sørlie, CM Perou, R Tibshirani, T Aas, S Geisler, H Johnsen, T Hastie, ... Proceedings of the National Academy of Sciences 98 (19), 10869-10874, 2001 | 11861 | 2001 |
Minimum information about a microarray experiment (MIAME)—toward standards for microarray data A Brazma, P Hingamp, J Quackenbush, G Sherlock, P Spellman, ... Nature genetics 29 (4), 365-371, 2001 | 4500 | 2001 |
Identification of genes periodically expressed in the human cell cycle and their expression in tumors ML Whitfield, G Sherlock, AJ Saldanha, JI Murray, CA Ball, KE Alexander, ... Molecular biology of the cell 13 (6), 1977-2000, 2002 | 1620 | 2002 |
The stanford microarray database G Sherlock, T Hernandez-Boussard, A Kasarskis, G Binkley, JC Matese, ... Nucleic acids research 29 (1), 152-155, 2001 | 564 | 2001 |
Coordination of growth rate, cell cycle, stress response, and metabolic activity in yeast MJ Brauer, C Huttenhower, EM Airoldi, R Rosenstein, JC Matese, ... Molecular biology of the cell 19 (1), 352-367, 2008 | 554 | 2008 |
SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data M Diehn, G Sherlock, G Binkley, H Jin, JC Matese, ... Nucleic acids research 31 (1), 219-223, 2003 | 505 | 2003 |
The Stanford Microarray Database: data access and quality assessment tools J Gollub, CA Ball, G Binkley, J Demeter, DB Finkelstein, JM Hebert, ... Nucleic Acids Research 31 (1), 94-96, 2003 | 409 | 2003 |
The Stanford Microarray Database accommodates additional microarray platforms and data formats CA Ball, IAB Awad, J Demeter, J Gollub, JM Hebert, ... Nucleic Acids Research 33 (suppl_1), D580-D582, 2005 | 244 | 2005 |
Transcriptional programs activated by exposure of human prostate cancer cells to androgen SE DePrimo, M Diehn, JB Nelson, RE Reiter, J Matese, M Fero, ... Genome biology 3 (7), 1-12, 2002 | 236 | 2002 |
The Stanford Microarray Database: implementation of new analysis tools and open source release of software J Demeter, C Beauheim, J Gollub, T Hernandez-Boussard, H Jin, D Maier, ... Nucleic acids research 35 (suppl_1), D766-D770, 2007 | 215 | 2007 |
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium AP Davis, K Dolinski, SS Dwight, JT Eppig, MA Harris, DP Hill, ... Nat Genet 25 (1), 2529, 2000 | 212 | 2000 |
The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes EC Swart, JR Bracht, V Magrini, P Minx, X Chen, Y Zhou, JS Khurana, ... PLoS Biol 11 (1), e1001473, 2013 | 172 | 2013 |
Submission of microarray data to public repositories CA Ball, A Brazma, H Causton, S Chervitz, R Edgar, P Hingamp, ... PLoS Biol 2 (9), e317, 2004 | 148 | 2004 |
Saccharomyces genome database JM Cherry, C Ball, K Dolinski, S Dwight, M Harris, JC Matese, G Sherlock, ... | 83 | 2001 |
Saccharomyces Genome Database provides tools to survey gene expression and functional analysis data CA Ball, H Jin, G Sherlock, S Weng, JC Matese, R Andrada, G Binkley, ... Nucleic acids research 29 (1), 80-81, 2001 | 75 | 2001 |
Sex, flies and microarrays GA Churchill, B Oliver Nature genetics 29 (4), 355-356, 2001 | 63 | 2001 |
Comparative genomic hybridizations of Entamoeba strains reveal unique genetic fingerprints that correlate with virulence PH Shah, RC MacFarlane, D Bhattacharya, JC Matese, J Demeter, ... Eukaryotic Cell 4 (3), 504-515, 2005 | 62 | 2005 |
Regulated exocytosis and sequential construction of the extracellular matrix surrounding the sea urchin zygote JC Matese, S Black, DR McClay Developmental biology 186 (1), 16-26, 1997 | 52 | 1997 |
Comprehensive single-cell transcriptome lineages of a proto-vertebrate C Cao, LA Lemaire, W Wang, PH Yoon, YA Choi, LR Parsons, JC Matese, ... Nature 571 (7765), 349-354, 2019 | 49 | 2019 |