Sinem Saka
Sinem Saka
EMBL Heidelberg
Verified email at - Homepage
Cited by
Cited by
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program
Caltech-UW TMC Cai Long lcai@ caltech. edu 21 b Shendure Jay 9 Trapnell Cole ...
Nature 574 (7777), 187-192, 2019
Immuno-SABER enables highly multiplexed and amplified protein imaging in tissues
SK Saka, Y Wang, JY Kishi, A Zhu, Y Zeng, W Xie, K Kirli, C Yapp, ...
Nature biotechnology 37 (9), 1080-1090, 2019
SABER amplifies FISH: enhanced multiplexed imaging of RNA and DNA in cells and tissues
JY Kishi, SW Lapan, BJ Beliveau, ER West, A Zhu, HM Sasaki, SK Saka, ...
Nature methods 16 (6), 533-544, 2019
Spatial mapping of protein composition and tissue organization: a primer for multiplexed antibody-based imaging
JW Hickey, EK Neumann, AJ Radtke, JM Camarillo, RT Beuschel, ...
Nature methods 19 (3), 284-295, 2022
Multi-protein assemblies underlie the mesoscale organization of the plasma membrane
SK Saka, A Honigmann, C Eggeling, SW Hell, T Lang, SO Rizzoli
Nature communications 5 (1), 4509, 2014
OligoMiner provides a rapid, flexible environment for the design of genome-scale oligonucleotide in situ hybridization probes
BJ Beliveau, JY Kishi, G Nir, HM Sasaki, SK Saka, SC Nguyen, C Wu, ...
Proceedings of the National Academy of Sciences 115 (10), E2183-E2192, 2018
Multiplexed 3D super-resolution imaging of whole cells using spinning disk confocal microscopy and DNA-PAINT
F Schueder, J Lara-Gutiérrez, BJ Beliveau, SK Saka, HM Sasaki, ...
Nature communications 8 (1), 2090, 2017
Correlated optical and isotopic nanoscopy
SK Saka, A Vogts, K Kröhnert, F Hillion, SO Rizzoli, JT Wessels
Nature communications 5 (1), 1-8, 2014
Mapping molecules in scanning far-field fluorescence nanoscopy
H Ta, J Keller, M Haltmeier, SK Saka, J Schmied, F Opazo, P Tinnefeld, ...
Nature communications 6 (1), 7977, 2015
Secondary‐Ion Mass Spectrometry of Genetically Encoded Targets
IC Vreja, S Kabatas, SK Saka, K Kröhnert, C Höschen, F Opazo, ...
Angewandte Chemie International Edition 54 (19), 5784-5788, 2015
Multiplexed signal amplification
JY Kishi, B Beliveau, P Yin, Y Wang, SK Saka
US Patent 11,492,661, 2022
Light-Seq: light-directed in situ barcoding of biomolecules in fixed cells and tissues for spatially indexed sequencing
JY Kishi, N Liu, ER West, K Sheng, JJ Jordanides, M Serrata, CL Cepko, ...
Nature Methods 19 (11), 1393-1402, 2022
Super‐resolution imaging prompts re‐thinking of cell biology mechanisms: selected cases using stimulated emission depletion microscopy
S Saka, SO Rizzoli
Bioessays 34 (5), 386-395, 2012
Single-strand RPA for rapid and sensitive detection of SARS-CoV-2 RNA
Y Kim, AB Yaseen, JY Kishi, F Hong, SK Saka, K Sheng, N Gopalkrishnan, ...
MedRxiv, 2020
SpatialData: an open and universal data framework for spatial omics
L Marconato, G Palla, KA Yamauchi, I Virshup, E Heidari, T Treis, ...
Nature Methods, 1-5, 2024
Super-resolution labelling with Action-PAINT
N Liu, M Dai, SK Saka, P Yin
Nature chemistry 11 (11), 1001-1008, 2019
A contamination-insensitive probe for imaging specific biomolecules by secondary ion mass spectrometry
S Kabatas, IC Vreja, SK Saka, C Höschen, K Kröhnert, F Opazo, ...
Chemical Communications 51 (67), 13221-13224, 2015
Multiplexed in situ protein imaging using DNA-barcoded antibodies with extended hybridization chain reactions
Y Wang, X Liu, Y Zeng, SK Saka, W Xie, I Goldaracena, RE Kohman, ...
Nucleic Acids Research, gkae592, 2024
Concurrent inhibition of CDK2 adds to the anti-tumour activity of CDK4/6 inhibition in GIST
IM Schaefer, ML Hemming, MZ Lundberg, MP Serrata, I Goldaracena, ...
British journal of cancer 127 (11), 2072-2085, 2022
Enablers and challenges of spatial omics, a melting pot of technologies
T Alexandrov, J Saez‐Rodriguez, SK Saka
Molecular Systems Biology 19 (11), e10571, 2023
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