Nuno Barbosa-Morais

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Simon TavaréColumbia UniversityVerified email at columbia.edu
Natalie ThorneThe Walter and Eliza Hall Institute of Medical Research and The University of Melbourne, AustraliaVerified email at wehi.edu.au
Andrew TeschendorffCAS Key Lab of Computational Biology, Shanghai Institute of Nutrition and Health, ShanghaiVerified email at sinh.ac.cn
Benjamin J. BlencoweProfessor, University of TorontoVerified email at utoronto.ca
Mark J DunningUniversity of SheffieldVerified email at sheffield.ac.uk
Andy LynchUniversity of St AndrewsVerified email at st-andrews.ac.uk
Suet Feung ChinUniversity of CambridgeVerified email at cam.ac.uk
Michael D. WilsonUniversity of Toronto and SickKids Research InstituteVerified email at sickkids.ca
Duncan T OdomUniversity of Heidelberg & German Cancer Research Center/DKFZVerified email at dkfz-heidelberg.de
Samuel AparicioUBC, BC Cancer Agency, VancouverVerified email at bccrc.ca
Brendan FreyFounder & CEO, Deep Genomics; Co-Founder, Vector Institute; Professor, University of TorontoVerified email at psi.toronto.edu
Manuel IrimiaCentre for Genomic RegulationVerified email at crg.eu
Matthew E RitchieThe Walter and Eliza Hall Institute of Medical ResearchVerified email at wehi.edu.au
Claudia KutterPrincipal Investigator, Karolinska Institute and SciLifeLab fellow, Science for Life LaboratoryVerified email at ki.se
Stephen WattSanger InstituteVerified email at sanger.ac.uk
Jeff WranaSenior Investigator, Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital, Toronto; Professor, Dept. of Mol. Gen., U. ofVerified email at lunenfeld.ca
Yanzhong WangProfessor of Statistics in Population Health, King's College LondonVerified email at kcl.ac.uk
Babak AlipanahiExai BioVerified email at exai.bio
Eric MiskaUniversity of Cambridge, Gurdon Institute & Department of GeneticsVerified email at cam.ac.uk
Philip M. KimProfessor, University of TorontoVerified email at kimlab.org

Nuno Barbosa-Morais

Research Group Leader, Instituto de Medicina Molecular - Lisbon

Verified email at medicina.ulisboa.pt - Homepage

Computational Biology Gene Regulation Alternative Splicing


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MicroRNA expression profiling of human breast cancer identifies new markers of tumor subtype C Blenkiron, LD Goldstein, NP Thorne, I Spiteri, SF Chin, MJ Dunning, ... Genome biology 8, 1-16, 2007	1240	2007
The evolutionary landscape of alternative splicing in vertebrate species NL Barbosa-Morais, M Irimia, Q Pan, HY Xiong, S Gueroussov, LJ Lee, ... Science 338 (6114), 1587-1593, 2012	1187	2012
Widespread intron retention in mammals functionally tunes transcriptomes U Braunschweig, NL Barbosa-Morais, Q Pan, EN Nachman, B Alipanahi, ... Genome research 24 (11), 1774-1786, 2014	717	2014
Neuronal regulation of type 2 innate lymphoid cells via neuromedin U V Cardoso, J Chesné, H Ribeiro, B García-Cassani, T Carvalho, ... Nature 549 (7671), 277-281, 2017	555	2017
High-resolution aCGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer SF Chin, AE Teschendorff, JC Marioni, Y Wang, NL Barbosa-Morais, ... Genome biology 8, 1-17, 2007	393	2007
MBNL proteins repress ES-cell-specific alternative splicing and reprogramming H Han, M Irimia, PJ Ross, HK Sung, B Alipanahi, L David, A Golipour, ... Nature 498 (7453), 241-245, 2013	357	2013
Species-specific transcription in mice carrying human chromosome 21 MD Wilson, NL Barbosa-Morais, D Schmidt, CM Conboy, L Vanes, ... Science 322 (5900), 434-438, 2008	341	2008
New androgen receptor genomic targets show an interaction with the ETS1 transcription factor CE Massie, B Adryan, NL Barbosa‐Morais, AG Lynch, MG Tran, DE Neal, ... EMBO reports 8 (9), 871-878, 2007	306	2007
A gene-expression signature to predict survival in breast cancer across independent data sets A Naderi, AE Teschendorff, NL Barbosa-Morais, SE Pinder, AR Green, ... Oncogene 26 (10), 1507-1516, 2007	305	2007
ASD: a bioinformatics resource on alternative splicing S Stamm, JJ Riethoven, V Le Texier, C Gopalakrishnan, V Kumanduri, ... Nucleic acids research 34 (suppl_1), D46-D55, 2006	293	2006
A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data NL Barbosa-Morais, MJ Dunning, SA Samarajiwa, JFJ Darot, ME Ritchie, ... Nucleic acids research 38 (3), e17-e17, 2010	288	2010
Global microRNA profiles in cervical squamous cell carcinoma depend on Drosha expression levels B Muralidhar, LD Goldstein, G Ng, DM Winder, RD Palmer, EL Gooding, ... The Journal of Pathology: A Journal of the Pathological Society of Great …, 2007	225	2007
PTBP1-mediated alternative splicing regulates the inflammatory secretome and the pro-tumorigenic effects of senescent cells A Georgilis, S Klotz, CJ Hanley, N Herranz, B Weirich, B Morancho, ... Cancer cell 34 (1), 85-102. e9, 2018	212	2018
Tissue-specific splicing factor gene expression signatures AR Grosso, AQ Gomes, NL Barbosa-Morais, S Caldeira, NP Thorne, ... Nucleic acids research 36 (15), 4823-4832, 2008	212	2008
Light-entrained and brain-tuned circadian circuits regulate ILC3s and gut homeostasis C Godinho-Silva, RG Domingues, M Rendas, B Raposo, H Ribeiro, ... Nature 574 (7777), 254-258, 2019	187	2019
SIK2 is a centrosome kinase required for bipolar mitotic spindle formation that provides a potential target for therapy in ovarian cancer AA Ahmed, Z Lu, NB Jennings, D Etemadmoghadam, L Capalbo, ... Cancer cell 18 (2), 109-121, 2010	182	2010
Alternative splicing: the pledge, the turn, and the prestige: the key role of alternative splicing in human biological systems LM Gallego-Paez, MC Bordone, AC Leote, N Saraiva-Agostinho, ... Human genetics 136, 1015-1042, 2017	155	2017
Over-elongation of centrioles in cancer promotes centriole amplification and chromosome missegregation G Marteil, A Guerrero, AF Vieira, BP De Almeida, P Machado, ... Nature communications 9 (1), 1258, 2018	140	2018
Statistical issues in the analysis of Illumina data MJ Dunning, NL Barbosa-Morais, AG Lynch, S Tavaré, ME Ritchie BMC bioinformatics 9, 1-15, 2008	140	2008
Association of ESR1 gene tagging SNPs with breast cancer risk AM Dunning, CS Healey, C Baynes, AT Maia, S Scollen, A Vega, ... Human molecular genetics 18 (6), 1131-1139, 2009	134	2009

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