Michael Fonstein
Michael Fonstein
Argonne National Lab
כתובת אימייל מאומתת בדומיין fonstein.com
צוטט על ידי
צוטט על ידי
The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ...
Nucleic acids research 33 (17), 5691-5702, 2005
The use of gene clusters to infer functional coupling
R Overbeek, M Fonstein, M D’souza, GD Pusch, N Maltsev
Proceedings of the National Academy of Sciences 96 (6), 2896-2901, 1999
Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis
N Ivanova, A Sorokin, I Anderson, N Galleron, B Candelon, V Kapatral, ...
Nature 423 (6935), 87-91, 2003
Experimental Determination and System Level Analysis of Essential Genes in Escherichia coli MG1655
SY Gerdes, MD Scholle, JW Campbell, G Balazsi, E Ravasz, ...
Journal of bacteriology 185 (19), 5673-5684, 2003
Complete sequence and comparative genome analysis of the dairy bacterium Streptococcus thermophilus
A Bolotin, B Quinquis, P Renault, A Sorokin, SD Ehrlich, S Kulakauskas, ...
Nature biotechnology 22 (12), 1554-1558, 2004
WIT: integrated system for high-throughput genome sequence analysis and metabolic reconstruction
R Overbeek, N Larsen, GD Pusch, M D’Souza, ES Jr, N Kyrpides, ...
Nucleic acids research 28 (1), 123-125, 2000
Genome Sequence and Analysis of the Oral Bacterium Fusobacterium nucleatum Strain ATCC 25586
V Kapatral, I Anderson, N Ivanova, G Reznik, T Los, A Lykidis, ...
Journal of bacteriology 184 (7), 2005-2018, 2002
From genetic footprinting to antimicrobial drug targets: examples in cofactor biosynthetic pathways
SY Gerdes, MD Scholle, M D'Souza, A Bernal, MV Baev, M Farrell, ...
Journal of Bacteriology 184 (16), 4555-4572, 2002
The ERGO TM genome analysis and discovery system
R Overbeek, N Larsen, T Walunas, M D'Souza, G Pusch, E Selkov Jr, ...
Nucleic acids research 31 (1), 164-171, 2003
Use of contiguity on the chromosome to predict functional coupling
R Overbeek, M Fonstein, M D'Souza, GD Pusch, N Maltsev
In silico biology 1 (2), 93-108, 1999
Essential genes on metabolic maps
S Gerdes, R Edwards, M Kubal, M Fonstein, R Stevens, A Osterman
Current opinion in biotechnology 17 (5), 448-456, 2006
Physical mapping of bacterial genomes
M Fonstein, R Haselkorn
Journal of Bacteriology 177 (12), 3361-3369, 1995
Comparative genome analysis of Bacillus cereus group genomes with Bacillus subtilis
I Anderson, A Sorokin, V Kapatral, G Reznik, A Bhattacharya, ...
FEMS Microbiology Letters 250 (2), 175-184, 2005
Functional analysis of gapped microbial genomes: amino acid metabolism of Thiobacillus ferrooxidans
E Selkov, R Overbeek, Y Kogan, L Chu, V Vonstein, D Holmes, S Silver, ...
Proceedings of the National Academy of Sciences 97 (7), 3509-3514, 2000
Chromosomal structure of Rhodobacter capsulatus strain SB1003: cosmid encyclopedia and high-resolution physical and genetic map.
M Fonstein, R Haselkorn
Proceedings of the National Academy of Sciences 90 (6), 2522-2526, 1993
The Rhodobacter capsulatus genome
R Haselkorn, A Lapidus, Y Kogan, C Vlcek, J Paces, V Paces, P Ulbrich, ...
Photosynthesis research 70 (1), 43-52, 2001
Sequence of a 189-kb segment of the chromosome of Rhodobacter capsulatus SB1003
Č Vlček, V Paces, N Maltsev, J Pačes, R Haselkorn, M Fonstein
Proceedings of the National Academy of Sciences 94 (17), 9384-9388, 1997
Refinement of the high‐resolution physical and genetic map of Rhodobacter capsulatus and genome surveys using blots of the cosmid encyclopedia.
M Fonstein, EG Koshy, T Nikolskaya, P Mourachov, R Haselkorn
The EMBO journal 14 (8), 1827-1841, 1995
Alignment of a 1.2-Mb chromosomal region from three strains of Rhodobacter capsulatus reveals a significantly mosaic structure
T Nikolskaya, M Fonstein, R Haselkorn
Proceedings of the National Academy of Sciences 92 (23), 10609-10613, 1995
Isolation, Cloning, Sequence Analysis and Localization of the Operon Encoding Dimethyl Sulfoxide/Trimethylamine N-oxide Reductase fromRhodobacter capsulatus
J Knäblein, K Mann, S Ehlert, M Fonstein, R Huber, F Schneider
Journal of molecular biology 263 (1), 40-52, 1996
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מאמרים 1–20