Ben Murrell
Ben Murrell
Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet
Verified email at ki.se
Title
Cited by
Cited by
Year
RDP4: Detection and analysis of recombination patterns in virus genomes
DP Martin, B Murrell, M Golden, A Khoosal, B Muhire
Virus evolution 1 (1), 2015
12072015
Detecting individual sites subject to episodic diversifying selection
B Murrell, JO Wertheim, S Moola, T Weighill, K Scheffler, SLK Pond
PLoS genetics 8 (7), 2012
8552012
FUBAR: a fast, unconstrained bayesian approximation for inferring selection
B Murrell, S Moola, A Mabona, T Weighill, D Sheward, ...
Molecular biology and evolution 30 (5), 1196-1205, 2013
5242013
A random effects branch-site model for detecting episodic diversifying selection
SL Kosakovsky Pond, B Murrell, M Fourment, SDW Frost, W Delport, ...
Molecular biology and evolution 28 (11), 3033-3043, 2011
3782011
Antibody 10-1074 suppresses viremia in HIV-1-infected individuals
M Caskey, T Schoofs, H Gruell, A Settler, T Karagounis, EF Kreider, ...
Nature medicine 23 (2), 185, 2017
1912017
Broadly neutralizing antibody responses in a large longitudinal sub-Saharan HIV primary infection cohort
E Landais, X Huang, C Havenar-Daughton, B Murrell, MA Price, ...
PLoS pathogens 12 (1), 2016
1742016
RELAX: detecting relaxed selection in a phylogenetic framework
JO Wertheim, B Murrell, MD Smith, SL Kosakovsky Pond, K Scheffler
Molecular biology and evolution 32 (3), 820-832, 2015
172*2015
Gene-wide identification of episodic selection
B Murrell, S Weaver, MD Smith, JO Wertheim, S Murrell, A Aylward, ...
Molecular biology and evolution 32 (5), 1365-1371, 2015
1712015
Less is more: an adaptive branch-site random effects model for efficient detection of episodic diversifying selection
MD Smith, JO Wertheim, S Weaver, B Murrell, K Scheffler, ...
Molecular biology and evolution 32 (5), 1342-1353, 2015
1672015
Early antibody lineage diversification and independent limb maturation lead to broad HIV-1 neutralization targeting the Env high-mannose patch
DT MacLeod, NM Choi, B Briney, F Garces, LS Ver, E Landais, B Murrell, ...
Immunity 44 (5), 1215-1226, 2016
852016
Social and genetic networks of HIV-1 transmission in New York City
JO Wertheim, SLK Pond, LA Forgione, SR Mehta, B Murrell, S Shah, ...
PLoS pathogens 13 (1), 2017
742017
Deep sequencing reveals minor protease resistance mutations in patients failing a protease inhibitor regimen
R Fisher, GU van Zyl, SAA Travers, SLK Pond, S Engelbrech, B Murrell, ...
Journal of virology 86 (11), 6231-6237, 2012
63*2012
HIV envelope glycoform heterogeneity and localized diversity govern the initiation and maturation of a V2 apex broadly neutralizing antibody lineage
E Landais, B Murrell, B Briney, S Murrell, K Rantalainen, ZT Berndsen, ...
Immunity 47 (5), 990-1003. e9, 2017
482017
HIV transmission networks in the San Diego–Tijuana border region
SR Mehta, JO Wertheim, KC Brouwer, KD Wagner, A Chaillon, ...
EBioMedicine 2 (10), 1456-1463, 2015
392015
Slow delivery immunization enhances HIV neutralizing antibody and germinal center responses via modulation of immunodominance
KM Cirelli, DG Carnathan, B Nogal, JT Martin, OL Rodriguez, ...
Cell 177 (5), 1153-1171. e28, 2019
382019
Detecting and analyzing genetic recombination using RDP4
DP Martin, B Murrell, A Khoosal, B Muhire
Bioinformatics, 433-460, 2017
352017
Evidence of pervasive biologically functional secondary structures within the genomes of eukaryotic single-stranded DNA viruses
BM Muhire, M Golden, B Murrell, P Lefeuvre, JM Lett, A Gray, AYF Poon, ...
Journal of virology 88 (4), 1972-1989, 2014
342014
Vaccine-induced protection from homologous tier 2 SHIV challenge in nonhuman primates depends on serum-neutralizing antibody titers
MG Pauthner, JP Nkolola, C Havenar-Daughton, B Murrell, SM Reiss, ...
Immunity 50 (1), 241-252. e6, 2019
332019
The evolutionary histories of antiretroviral proteins SERINC3 and SERINC5 do not support an evolutionary arms race in primates
B Murrell, T Vollbrecht, J Guatelli, JO Wertheim
Journal of virology 90 (18), 8085-8089, 2016
302016
Next generation sequencing improves detection of drug resistance mutations in infants after PMTCT failure
RG Fisher, DM Smith, B Murrell, R Slabbert, BM Kirby, C Edson, ...
Journal of Clinical Virology 62, 48-53, 2015
302015
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Articles 1–20