Krishnakumar Mayuram Ravikumar
Krishnakumar Mayuram Ravikumar
Lead Data Scientist, Riviera Partners
Verified email at ucdavis.edu
Title
Cited by
Cited by
Year
Molecular basis for optical clearing of collagenous tissues
JM Hirshburg, KM Ravikumar, W Hwang, AT Yeh
Journal of biomedical optics 15 (5), 055002, 2010
912010
Quantitative mapping of protein structure by hydroxyl radical footprinting-mediated structural mass spectrometry: a protection factor analysis
W Huang, KM Ravikumar, MR Chance, S Yang
Biophysical journal 108 (1), 107-115, 2015
762015
Engineering amyloid fibrils from β-solenoid proteins for biomaterials applications
MDR Peralta, A Karsai, A Ngo, C Sierra, KT Fong, NR Hayre, N Mirzaee, ...
Acs Nano 9 (1), 449-463, 2015
592015
Region‐specific role of water in collagen unwinding and assembly
KM Ravikumar, W Hwang
Proteins: Structure, Function, and Bioinformatics 72 (4), 1320-1332, 2008
582008
Coarse-grained simulations of protein-protein association: an energy landscape perspective
KM Ravikumar, W Huang, S Yang
Biophysical journal 103 (4), 837-845, 2012
542012
Fast-SAXS-pro: A unified approach to computing SAXS profiles of DNA, RNA, protein, and their complexes
KM Ravikumar, W Huang, S Yang
The Journal of chemical physics 138 (2), 01B609, 2013
492013
Theoretical modeling of multiprotein complexes by iSPOT: Integration of small-angle X-ray scattering, hydroxyl radical footprinting, and computational docking
W Huang, KM Ravikumar, M Parisien, S Yang
Journal of structural biology 196 (3), 340-349, 2016
292016
Spontaneous unwinding of a labile domain in a collagen triple helix
K Ravikumar, J Humphrey, W Hwang
Journal of Mechanics of Materials and Structures 2 (6), 999-1010, 2007
222007
Role of hydration force in the self-assembly of collagens and amyloid steric zipper filaments
KM Ravikumar, W Hwang
Journal of the American Chemical Society 133 (30), 11766-11773, 2011
202011
Cross‐talk between the ligand‐and DNA‐binding domains of estrogen receptor
W Huang, GL Greene, KM Ravikumar, S Yang
Proteins: Structure, Function, and Bioinformatics 81 (11), 1900-1909, 2013
132013
A newfound cancer-activating mutation reshapes the energy landscape of estrogen-binding domain
W Huang, KM Ravikumar, S Yang
Journal of chemical theory and computation 10 (8), 2897-2900, 2014
102014
Site-directed mutant libraries for isolating minimal mutations yielding functional changes
DH Chung, SC Potter, AC Tanomrat, KM Ravikumar, MD Toney
Protein Engineering, Design and Selection 30 (5), 347-357, 2017
82017
In silico measurements of twist and bend moduli for β-solenoid protein self-assembly units
LP Heinz, KM Ravikumar, DL Cox
Nano letters 15 (5), 3035-3040, 2015
82015
High tensile strength of engineered β-solenoid fibrils via sonication and pulling
Z Peng, AS Parker, MDR Peralta, KM Ravikumar, DL Cox, MD Toney
Biophysical journal 113 (9), 1945-1955, 2017
62017
Molecular dynamics-based strength estimates of beta solenoid proteins
A Parker, K Ravikumar, D Cox
Soft matter 13 (36), 6218-6226, 2017
22017
Energy Evaluation of β-Strand Packing in a Fibril-Forming SH3 Domain
S Yang, KM Ravikumar, H Levine
The Journal of Physical Chemistry B 117 (42), 13051-13057, 2013
12013
Integrative SAXS‐Driven Computational Modeling of Biomolecular Complexes
L Song, L Lu, W Huang, KM Ravikumar, J Meng, S Yang
Synchrotron Radiation in Materials Science: Light Sources, Techniques, and …, 2018
2018
Estimates of Twisting and Bending Rigidities of Beta-Solenoid Proteins Using Molecular Dynamics
A Parker, K Ravikumar, D Cox
APS March Meeting Abstracts 2017, R4. 007, 2017
2017
Mechanical Strength of Beta-Solenoid Proteins Under Bending and Twisting Simulations
A Parker, K Ravikumar, D Cox
Bulletin of the American Physical Society 61, 2016
2016
Designing beta solenoid proteins for nanoscale materials and devices
M Peralta, Z Peng, A Karsai, A Ngo, C Sierra, K Ravikumar, N Hayre, ...
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 251, 2016
2016
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Articles 1–20