Lily C. Hughes
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Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data
LC Hughes, G Ortí, Y Huang, Y Sun, CC Baldwin, AW Thompson, D Arcila, ...
Proceedings of the National Academy of Sciences 115 (24), 6249-6254, 2018
Multi-locus fossil-calibrated phylogeny of Atheriniformes (Teleostei, Ovalentaria)
D Campanella, LC Hughes, PJ Unmack, DD Bloom, KR Piller, G Ortí
Molecular phylogenetics and evolution 86, 8-23, 2015
Phylogenomic incongruence, hypothesis testing, and taxonomic sampling: The monophyly of characiform fishes
R Betancur‐R, D Arcila, RP Vari, LC Hughes, C Oliveira, MH Sabaj, G Orti
Evolution 73 (2), 329-345, 2019
Transcriptomic differentiation underlying marine‐to‐freshwater transitions in the South American silversides Odontesthes argentinensis and O. bonariensis (Atheriniformes)
LC Hughes, GM Somoza, BN Nguyen, JP Bernot, M González‐Castro, ...
Ecology and evolution 7 (14), 5258-5268, 2017
Kisspeptin system in pejerrey fish (Odontesthes bonariensis). Characterization and gene expression pattern during early developmental stages
MOT Bohórquez, AS Mechaly, LC Hughes, D Campanella, G Ortí, ...
Comparative Biochemistry and Physiology Part A: Molecular & Integrative …, 2017
Phylogenomics of piranhas and pacus (Serrasalmidae) uncovers how dietary convergence and parallelism obfuscate traditional morphological taxonomy
MA Kolmann, LC Hughes, LP Hernandez, D Arcila, R Betancur-R, ...
Systematic Biology 70 (3), 576-592, 2021
Exon probe sets and bioinformatics pipelines for all levels of fish phylogenomics
LC Hughes, G Ortí, H Saad, C Li, WT White, CC Baldwin, KA Crandall, ...
Molecular Ecology Resources 21 (3), 816-833, 2021
Biogeography, habitat transitions and hybridization in a radiation of South American silverside fishes revealed by mitochondrial and genomic RAD data
LC Hughes, YP Cardoso, JA Sommer, R Cifuentes, M Cuello, ...
Molecular Ecology 29 (4), 738-751, 2020
Evolutionary determinism and convergence associated with water-column transitions in marine fishes
M Rincon-Sandoval, E Duarte-Ribeiro, AM Davis, A Santaquiteria, ...
Proceedings of the National Academy of Sciences 117 (52), 33396-33403, 2020
Can ecotypic differences in male courtship behaviour be explained by visual cues provided by female threespine stickleback?
LC Hughes, SA Foster, JA Baker
Evolutionary Ecology Research 15 (4), 437-451, 2013
Testing the utility of alternative metrics of branch support to address the ancient evolutionary radiation of tunas, stromateoids, and allies (Teleostei: Pelagiaria)
D Arcila, LC Hughes, B Meléndez-Vazquez, CC Baldwin, WT White, ...
Systematic Biology, 2021
Phylogenomics of bonytongue fishes (Osteoglossomorpha) shed light on the craniofacial evolution and biogeography of the weakly electric clade Mormyridae
RD Peterson, JP Sullivan, CD Hopkins, A Santaquiteria, CB Dillman, ...
Systematic biology, syac001, 2022
Exon-capture data and locus screening provide new insights into the phylogeny of flatfishes (Pleuronectoidei)
CJ Atta, H Yuan, C Li, D Arcila, R Betancur-R, LC Hughes, G Ortí, ...
Molecular phylogenetics and evolution 166, 107315, 2022
Tackling Evolutionary Questions in Fishes with Genome-Wide Data from Recent Speciation to Ancient Divergences
LC Hughes
The George Washington University, 2018
Lack of Male Mate Preference Among Diverging Ecotypes in the Threespine Stickleback, Gasterosteus Aculeatus
LC Hughes
Clark University, 2012
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Articles 1–15