Konstantinos Krampis
Konstantinos Krampis
City University of NY
Verified email at hunter.cuny.edu - Homepage
Title
Cited by
Cited by
Year
Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis
BM Tyler, S Tripathy, X Zhang, P Dehal, RHY Jiang, A Aerts, ...
Science 313 (5791), 1261-1266, 2006
10612006
Cloud BioLinux: pre-configured and on-demand bioinformatics computing for the genomics community
K Krampis, T Booth, B Chapman, B Tiwari, M Bicak, D Field, KE Nelson
BMC bioinformatics 13 (1), 1-8, 2012
1852012
Araport: the Arabidopsis information portal
V Krishnakumar, MR Hanlon, S Contrino, ES Ferlanti, S Karamycheva, ...
Nucleic acids research 43 (D1), D1003-D1009, 2015
1792015
Tight regulation of expression of two Arabidopsis cytosolic Hsp90 genes during embryo development
C Prasinos, K Krampis, D Samakovli, P Hatzopoulos
Journal of experimental botany 56 (412), 633-644, 2005
782005
Genetic variants in root architecture-related genes in a Glycine soja accession, a potential resource to improve cultivated soybean
SJ Prince, L Song, D Qiu, JVM Dos Santos, C Chai, T Joshi, G Patil, ...
BMC genomics 16 (1), 1-20, 2015
582015
Analysis of Genes Underlying Soybean Quantitative Trait Loci Conferring Partial Resistance to Phytophthora sojae
H Wang, LC Waller, S Tripathy, SK St. Martin, L Zhou, K Krampis, ...
The Plant Genome 3 (1), 2010
572010
Comparing microbiome sampling methods in a wild mammal: fecal and intestinal samples record different signals of host ecology, evolution
MR Ingala, NB Simmons, C Wultsch, K Krampis, KA Speer, SL Perkins
Frontiers in microbiology 9, 803, 2018
512018
Infection and genotype remodel the entire soybean transcriptome
L Zhou, SX Mideros, L Bao, R Hanlon, FD Arredondo, S Tripathy, ...
BMC genomics 10 (1), 1-19, 2009
452009
miR-1207-3p regulates the androgen receptor in prostate cancer via FNDC1/fibronectin
DK Das, M Naidoo, A Ilboudo, JY Park, T Ali, K Krampis, BD Robinson, ...
Experimental cell research 348 (2), 190-200, 2016
422016
Baseline human gut microbiota profile in healthy people and standard reporting template
CH King, H Desai, AC Sylvetsky, J LoTempio, S Ayanyan, J Carrie, ...
PloS one 14 (9), e0206484, 2019
332019
Census-based rapid and accurate metagenome taxonomic profiling
A Shamsaddini, Y Pan, WE Johnson, K Krampis, M Shcheglovitova, ...
BMC genomics 15 (1), 1-13, 2014
202014
Enabling precision medicine via standard communication of HTS provenance, analysis, and results
G Alterovitz, D Dean, C Goble, MR Crusoe, S Soiland-Reyes, A Bell, ...
PLoS biology 16 (12), e3000099, 2018
192018
Non-synonymous variations in cancer and their effects on the human proteome: workflow for NGS data biocuration and proteome-wide analysis of TCGA data
C Cole, K Krampis, K Karagiannis, JS Almeida, WJ Faison, M Motwani, ...
BMC bioinformatics 15 (1), 1-18, 2014
172014
Bio-Docklets: virtualization containers for single-step execution of NGS pipelines
Krampis K., Kim B., Ali T., Lijeron C., Afgan E.
Gigascience 6 (8), 1-7, 2017
13*2017
Extensive variation in nuclear mitochondrial DNA content between the genomes of Phytophthora sojae and Phytophthora ramorum
K Krampis, BM Tyler, JL Boore
Molecular plant-microbe interactions 19 (12), 1329-1336, 2006
122006
Visual Omics Explorer (VOE): a cross-platform portal for interactive data visualization
B Kim, T Ali, S Hosmer, K Krampis
Bioinformatics 32 (13), 2050-2052, 2016
112016
Functional Genomics and Bioinformatics of the Phytophthora sojae Soybean Interaction
BM Tyler, RHY Jiang, L Zhou, S Tripathy, D Dou, T Torto-Alalibo, H Li, ...
Genomics of Disease, 67-78, 2008
102008
Genomes highlight plant pathogens' powerful arsenal
E Stokstad
Science 313 (5791), 1217-1217, 2006
102006
Genotyping and quantifying Lyme pathogen strains by deep sequencing of the outer surface protein C (ospC) locus
L Di, Z Wan, S Akther, C Ying, A Larracuente, L Li, C Di, R Nunez, ...
Journal of clinical microbiology 56 (11), 2018
82018
A review of cloud computing bioinformatics solutions for next-gen sequencing data analysis and research
K Krampis, C Wultsch
Methods in Next Generation Sequencing 2 (1), 2015
72015
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