Maria Kochugaeva
Maria Kochugaeva
postdoctoral associate, Yale University
Verified email at yale.edu
Title
Cited by
Cited by
Year
Role of static and dynamic obstacles in the protein search for targets on DNA
A Shvets, M Kochugaeva, AB Kolomeisky
The Journal of Physical Chemistry B 120 (26), 5802-5809, 2016
232016
Protein search for multiple targets on DNA
M Lange, M Kochugaeva, AB Kolomeisky
The Journal of chemical physics 143 (10), 09B605_1, 2015
232015
Dynamics of the protein search for targets on DNA in the presence of traps
M Lange, M Kochugaeva, AB Kolomeisky
The Journal of Physical Chemistry B 119 (38), 12410-12416, 2015
212015
Application of molecular modeling to development of new factor Xa inhibitors
VB Sulimov, IV Gribkova, MP Kochugaeva, EV Katkova, AV Sulimov, ...
BioMed Research International 2015, 2015
202015
Mechanisms of protein search for targets on DNA: theoretical insights
AA Shvets, MP Kochugaeva, AB Kolomeisky
Molecules 23 (9), 2106, 2018
192018
How conformational dynamics influences the protein search for targets on DNA
MP Kochugaeva, AA Shvets, AB Kolomeisky
Journal of Physics A: Mathematical and Theoretical 49 (44), 444004, 2016
132016
On the mechanism of homology search by RecA protein filaments
MP Kochugaeva, AA Shvets, AB Kolomeisky
Biophysical journal 112 (5), 859-867, 2017
102017
Optimal length of conformational transition region in protein search for targets on DNA
MP Kochugaeva, AM Berezhkovskii, AB Kolomeisky
The journal of physical chemistry letters 8 (17), 4049-4054, 2017
92017
Elucidating the correlations between cancer initiation times and lifetime cancer risks
H Teimouri, MP Kochugaeva, AB Kolomeisky
Scientific reports 9 (1), 1-8, 2019
42019
PCM, COSMO and Surface GB implementation in program DISOLV: Development and validation
VB Sulimov, EV Katkova, IV Oferkin, MP Kochugaeva
244th ACS National Meeting, Philadelphia, Pennsylvania, USA, 2012
42012
Kinetics of Protein–DNA Interactions: First-Passage Analysis
MP Kochugaeva, AA Shvets, AB Kolomeisky
Chemical Kinetics: Beyond the Textbook, 473-492, 2020
2020
When will the cancer start? Elucidating the correlations between cancer initiation times and lifetime cancer risks
H Teimouri, M Kochugaeva, AB Kolomeisky
bioRxiv, 640284, 2019
2019
Theoretical investigation of protein search for targets on DNA
M Kochugaeva
2017
Theoretical investigation of RecA filaments search for DNA breaks
M Kochugaeva, A Shvets, A Kolomeisky
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 253, 2017
2017
How Conformational Dynamics Influences the Protein Search for Targets on DNA
MP Kochugaeva, AA Shvets, AB Kolomeisky
Biophysical Journal 112 (3), 314a, 2017
2017
Protein Search for Multiple Targets on DNA
M Kochugaeva, M Lange, A Kolomeisky
Biophysical Journal 110 (3), 236a, 2016
2016
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