Mor Nitzan
Mor Nitzan
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Deep learning and alignment of spatially resolved single-cell transcriptomes with Tangram
T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ...
Nature methods 18 (11), 1352-1362, 2021
Gene expression cartography
M Nitzan, N Karaiskos, N Friedman, N Rajewsky
Nature 576 (7785), 132-137, 2019
Evidence for functional networks within the human brain's white matter
M Peer, M Nitzan, AS Bick, N Levin, S Arzy
Journal of Neuroscience 37 (27), 6394-6407, 2017
Integration of bacterial small RNAs in regulatory networks
M Nitzan, R Rehani, H Margalit
Annual review of biophysics 46, 131-148, 2017
Single-cell analysis of germinal-center B cells informs on lymphoma cell of origin and outcome
AB Holmes, C Corinaldesi, Q Shen, R Kumar, N Compagno, Z Wang, ...
Journal of Experimental Medicine 217 (10), e20200483, 2020
Model-free inference of direct network interactions from nonlinear collective dynamics
J Casadiego, M Nitzan, S Hallerberg, M Timme
Nature communications 8 (1), 2192, 2017
ChIP-seq of plasma cell-free nucleosomes identifies gene expression programs of the cells of origin
R Sadeh, I Sharkia, G Fialkoff, A Rahat, J Gutin, A Chappleboim, M Nitzan, ...
Nature biotechnology 39 (5), 586-598, 2021
Revealing physical interaction networks from statistics of collective dynamics
M Nitzan, J Casadiego, M Timme
Science advances 3 (2), e1600396, 2017
Statistical optimal transport via factored couplings
A Forrow, JC Hütter, M Nitzan, P Rigollet, G Schiebinger, J Weed
The 22nd International Conference on Artificial Intelligence and Statistics …, 2019
Reversible functional connectivity disturbances during transient global amnesia
M Peer, M Nitzan, I Goldberg, J Katz, JM Gomori, T Ben‐Hur, S Arzy
Annals of neurology 75 (5), 634-643, 2014
Dynamics of the type III secretion system activity of enteropathogenic Escherichia coli
E Mills, K Baruch, G Aviv, M Nitzan, I Rosenshine
MBio 4 (4), 10.1128/mbio. 00303-13, 2013
NovoSpaRc: flexible spatial reconstruction of single-cell gene expression with optimal transport
N Moriel, E Senel, N Friedman, N Rajewsky, N Karaiskos, M Nitzan
Nature protocols 16 (9), 4177-4200, 2021
Analytical results for the distribution of shortest path lengths in random networks
E Katzav, M Nitzan, D ben-Avraham, PL Krapivsky, R Kühn, N Ross, ...
Europhysics Letters 111 (2), 2015
Bundle-forming pilus retraction enhances enteropathogenic Escherichia coli infectivity
EE Zahavi, JA Lieberman, MS Donnenberg, M Nitzan, K Baruch, ...
Molecular biology of the cell 22 (14), 2436-2447, 2011
Interactions between distant ceRNAs in regulatory networks
M Nitzan, A Steiman-Shimony, Y Altuvia, O Biham, H Margalit
Biophysical Journal 106 (10), 2254-2266, 2014
Deep learning and alignment of spatially-resolved whole transcriptomes of single cells in the mouse brain with Tangram
T Biancalani, G Scalia, L Buffoni, R Avasthi, Z Lu, A Sanger, N Tokcan, ...
Biorxiv, 2020.08. 29.272831, 2020
Distance distribution in configuration-model networks
M Nitzan, E Katzav, R Kühn, O Biham
Physical Review E 93 (6), 062309, 2016
Selective flexible packaging pathways of the segmented genome of influenza A virus
I Haralampiev, S Prisner, M Nitzan, M Schade, F Jolmes, M Schreiber, ...
Nature communications 11 (1), 4355, 2020
A defense-offense multi-layered regulatory switch in a pathogenic bacterium
M Nitzan, P Fechter, A Peer, Y Altuvia, D Bronesky, F Vandenesch, ...
Nucleic Acids Research 43 (3), 1357-1369, 2015
Degradation of Ndd1 by APC/CCdh1 generates a feed forward loop that times mitotic protein accumulation
J Sajman, D Zenvirth, M Nitzan, H Margalit, KJ Simpson-Lavy, Y Reiss, ...
Nature communications 6 (1), 7075, 2015
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