Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer SD Bailey, K Desai, KJ Kron, P Mazrooei, NA Sinnott-Armstrong, ... Nature genetics 48 (10), 1260-1266, 2016 | 94 | 2016 |
Noncoding mutations target cis-regulatory elements of the FOXA1 plexus in prostate cancer S Zhou, JR Hawley, F Soares, G Grillo, M Teng, SA Madani Tonekaboni, ... Nature communications 11 (1), 441, 2020 | 66 | 2020 |
Cistrome partitioning reveals convergence of somatic mutations and risk variants on master transcription regulators in primary prostate tumors P Mazrooei, KJ Kron, Y Zhu, S Zhou, G Grillo, T Mehdi, M Ahmed, ... Cancer Cell 36 (6), 674-689. e6, 2019 | 55 | 2019 |
CRISPRi screens reveal a DNA methylation-mediated 3D genome dependent causal mechanism in prostate cancer M Ahmed, F Soares, JH Xia, Y Yang, J Li, H Guo, P Su, Y Tian, HJ Lee, ... Nature communications 12 (1), 1781, 2021 | 36 | 2021 |
A noncoding single-nucleotide polymorphism at 8q24 drives IDH1-mutant glioma formation C Yanchus, KL Drucker, TM Kollmeyer, R Tsai, W Winick-Ng, M Liang, ... Science 378 (6615), 68-78, 2022 | 30 | 2022 |
Identifying clusters of cis-regulatory elements underpinning TAD structures and lineage-specific regulatory networks SAM Tonekaboni, P Mazrooei, V Kofia, B Haibe-Kains, M Lupien Genome research 29 (10), 1733-1743, 2019 | 27 | 2019 |
The logic of transcriptional regulator recruitment architecture at cis-regulatory modules controlling liver functions J Dubois-Chevalier, V Dubois, H Dehondt, P Mazrooei, C Mazuy, ... Genome Research 27 (6), 985-996, 2017 | 24 | 2017 |
Organizing combinatorial transcription factor recruitment at cis-regulatory modules J Dubois-Chevalier, P Mazrooei, M Lupien, B Staels, P Lefebvre, ... Transcription 9 (4), 233-239, 2018 | 17 | 2018 |
Automating collusion detection in sequential games P Mazrooei, C Archibald, M Bowling Proceedings of the AAAI Conference on Artificial Intelligence 27 (1), 675-682, 2013 | 12 | 2013 |
CREAM: Clustering of genomic REgions analysis method SAM Tonekaboni, P Mazrooei, V Kofia, B Haibe-Kains, M Lupien BioRxiv, 222562, 2017 | 10 | 2017 |
Candidate cancer driver mutations in superenhancers and long-range chromatin interaction networks L Wadi, L Uusküla-Reimand, K Isaev, S Shuai, V Huang, M Liang, ... BioRxiv, 236802, 2017 | 8 | 2017 |
A note on the p-time algorithms for solving the maximum independent set problem NN Esfahani, P Mazrooei, K Mahdaviani, B Omoomi 2009 2nd Conference on Data Mining and Optimization, 65-70, 2009 | 6 | 2009 |
Mutations in Noncoding Cis-Regulatory Elements Reveal Cancer Driver Cistromes in Luminal Breast Cancer S El Ghamrasni, R Quevedo, J Hawley, P Mazrooei, Y Hanna, I Cirlan, ... Molecular Cancer Research 20 (1), 102-113, 2022 | 3 | 2022 |
Collusion detection in sequential games P Mazrooei | 2 | 2012 |
Proximity user identification using correlogram S Shahidi, P Mazrooei, NN Esfahani, M Saraee Intelligent Information Processing V: 6th IFIP TC 12 International …, 2010 | 2 | 2010 |
Non-coding mutations reveal cancer driver cistromes in luminal breast cancer SE Ghamrasni, R Quevedo, J Hawley, P Mazrooei, Y Hanna, I Cirlan, ... bioRxiv, 2021.05. 29.446210, 2021 | | 2021 |
Role of Noncoding Single Nucleotide Variants on Transcription Factors’ activity in Cancer P Mazrooei University of Toronto (Canada), 2019 | | 2019 |