| GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways KD Dahlquist, N Salomonis, K Vranizan, SC Lawlor, BR Conklin Nature genetics 31 (1), 19-20, 2002 | 1179 | 2002 |
| MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data SW Doniger, N Salomonis, KD Dahlquist, K Vranizan, SC Lawlor, ... Genome biology 4, 1-12, 2003 | 1112 | 2003 |
| Single-cell analysis of mixed-lineage states leading to a binary cell fate choice A Olsson, M Venkatasubramanian, VK Chaudhri, BJ Aronow, ... Nature 537 (7622), 698-702, 2016 | 517 | 2016 |
| Granulocyte-monocyte progenitors and monocyte-dendritic cell progenitors independently produce functionally distinct monocytes A Yáñez, SG Coetzee, A Olsson, DE Muench, BP Berman, DJ Hazelett, ... Immunity 47 (5), 890-902. e4, 2017 | 408 | 2017 |
| Transcription factors operate across disease loci, with EBNA2 implicated in autoimmunity JB Harley, X Chen, M Pujato, D Miller, A Maddox, C Forney, ... Nature genetics 50 (5), 699-707, 2018 | 361 | 2018 |
| AltAnalyze and DomainGraph: analyzing and visualizing exon expression data D Emig, N Salomonis, J Baumbach, T Lengauer, BR Conklin, M Albrecht Nucleic acids research 38 (suppl_2), W755-W762, 2010 | 352 | 2010 |
| GenMAPP 2: new features and resources for pathway analysis N Salomonis, K Hanspers, AC Zambon, K Vranizan, SC Lawlor, ... BMC bioinformatics 8, 1-12, 2007 | 330 | 2007 |
| GO-Elite: a flexible solution for pathway and ontology over-representation AC Zambon, S Gaj, I Ho, K Hanspers, K Vranizan, CT Evelo, BR Conklin, ... Bioinformatics 28 (16), 2209-2210, 2012 | 297 | 2012 |
| Lentiviral vectors and protocols for creation of stable hESC lines for fluorescent tracking and drug resistance selection of cardiomyocytes H Kita-Matsuo, M Barcova, N Prigozhina, N Salomonis, K Wei, JG Jacot, ... PloS one 4 (4), e5046, 2009 | 296 | 2009 |
| Time-and exercise-dependent gene regulation in human skeletal muscle AC Zambon, EL McDearmon, N Salomonis, KM Vranizan, KL Johansen, ... Genome biology 4, 1-12, 2003 | 295 | 2003 |
| Reactive oxygen species-mediated therapeutic response and resistance in glioblastoma E Singer, J Judkins, N Salomonis, L Matlaf, P Soteropoulos, S McAllister, ... Cell death & disease 6 (1), e1601-e1601, 2015 | 267 | 2015 |
| Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation N Salomonis, CR Schlieve, L Pereira, C Wahlquist, A Colas, AC Zambon, ... Proceedings of the National Academy of Sciences 107 (23), 10514-10519, 2010 | 267 | 2010 |
| Single-nucleus RNA-seq identifies transcriptional heterogeneity in multinucleated skeletal myofibers MJ Petrany, CO Swoboda, C Sun, K Chetal, X Chen, MT Weirauch, ... Nature communications 11 (1), 6374, 2020 | 237 | 2020 |
| Conditional expression of a Gi-coupled receptor causes ventricular conduction delay and a lethal cardiomyopathy CH Redfern, MY Degtyarev, AT Kwa, N Salomonis, N Cotte, T Nanevicz, ... Proceedings of the National Academy of Sciences 97 (9), 4826-4831, 2000 | 206 | 2000 |
| U2AF1 mutations induce oncogenic IRAK4 isoforms and activate innate immune pathways in myeloid malignancies MA Smith, GS Choudhary, A Pellagatti, K Choi, LC Bolanos, TD Bhagat, ... Nature cell biology 21 (5), 640-650, 2019 | 203 | 2019 |
| The Human Cell Atlas bone marrow single-cell interactive web portal SB Hay, K Ferchen, K Chetal, HL Grimes, N Salomonis Experimental hematology 68, 51-61, 2018 | 203 | 2018 |
| The kSORT assay to detect renal transplant patients at high risk for acute rejection: results of the multicenter AART study S Roedder, T Sigdel, N Salomonis, S Hsieh, H Dai, O Bestard, D Metes, ... PLoS medicine 11 (11), e1001759, 2014 | 200 | 2014 |
| Combinatorial single-cell analyses of granulocyte-monocyte progenitor heterogeneity reveals an early uni-potent neutrophil progenitor I Kwok, E Becht, Y Xia, M Ng, YC Teh, L Tan, M Evrard, JLY Li, HTN Tran, ... Immunity 53 (2), 303-318. e5, 2020 | 199 | 2020 |
| A robust method to derive functional neural crest cells from human pluripotent stem cells FR Kreitzer, N Salomonis, A Sheehan, M Huang, JS Park, MJ Spindler, ... American journal of stem cells 2 (2), 119, 2013 | 191 | 2013 |
| Defining human cardiac transcription factor hierarchies using integrated single-cell heterogeneity analysis JM Churko, P Garg, B Treutlein, M Venkatasubramanian, H Wu, J Lee, ... Nature communications 9 (1), 4906, 2018 | 183 | 2018 |
