| Association between breast milk bacterial communities and establishment and development of the infant gut microbiome PS Pannaraj, F Li, C Cerini, JM Bender, S Yang, A Rollie, H Adisetiyo, ... JAMA pediatrics 171 (7), 647-654, 2017 | 1001 | 2017 |
| Inflammation, antibiotics, and diet as environmental stressors of the gut microbiome in pediatric Crohn’s disease JD Lewis, EZ Chen, RN Baldassano, AR Otley, AM Griffiths, D Lee, ... Cell host & microbe 18 (4), 489-500, 2015 | 824 | 2015 |
| Comparison of placenta samples with contamination controls does not provide evidence for a distinct placenta microbiota AP Lauder, AM Roche, S Sherrill-Mix, A Bailey, AL Laughlin, K Bittinger, ... Microbiome 4, 1-11, 2016 | 524 | 2016 |
| Virus-helminth coinfection reveals a microbiota-independent mechanism of immunomodulation LC Osborne, LA Monticelli, TJ Nice, TE Sutherland, MC Siracusa, ... Science 345 (6196), 578-582, 2014 | 275 | 2014 |
| Viral metagenomics reveal blooms of anelloviruses in the respiratory tract of lung transplant recipients JC Young, C Chehoud, K Bittinger, A Bailey, JM Diamond, E Cantu, ... American Journal of Transplantation 15 (1), 200-209, 2015 | 206 | 2015 |
| A role for bacterial urease in gut dysbiosis and Crohn’s disease J Ni, TCD Shen, EZ Chen, K Bittinger, A Bailey, M Roggiani, A Sirota-Madi, ... Science translational medicine 9 (416), eaah6888, 2017 | 197 | 2017 |
| Human and rat gut microbiome composition is maintained following sleep restriction SL Zhang, L Bai, N Goel, A Bailey, CJ Jang, FD Bushman, P Meerlo, ... Proceedings of the National Academy of Sciences 114 (8), E1564-E1571, 2017 | 133 | 2017 |
| Peptidoglycan from the gut microbiota governs the lifespan of circulating phagocytes at homeostasis CB Hergott, AM Roche, E Tamashiro, TB Clarke, AG Bailey, A Laughlin, ... Blood, The Journal of the American Society of Hematology 127 (20), 2460-2471, 2016 | 112 | 2016 |
| INSPIIRED: a pipeline for quantitative analysis of sites of new DNA integration in cellular genomes E Sherman, C Nobles, CC Berry, E Six, Y Wu, A Dryga, N Malani, F Male, ... Molecular Therapy-Methods & Clinical Development 4, 39-49, 2017 | 97 | 2017 |
| Population structure of human gut bacteria in a diverse cohort from rural Tanzania and Botswana MEB Hansen, MA Rubel, AG Bailey, A Ranciaro, SR Thompson, ... Genome Biology 20, 1-21, 2019 | 91 | 2019 |
| A pilot characterization of the human chronobiome C Skarke, NF Lahens, SD Rhoades, A Campbell, K Bittinger, A Bailey, ... Scientific reports 7 (1), 17141, 2017 | 85 | 2017 |
| Characterization of resistance gene analogues (RGAs) in apple (Malus× domestica Borkh.) and their evolutionary history of the Rosaceae family M Perazzolli, G Malacarne, A Baldo, L Righetti, A Bailey, P Fontana, ... PloS one 9 (2), e83844, 2014 | 76 | 2014 |
| On-farm paddock-scale comparisons across southern Australia confirm that increasing the nutrition of Merino ewes improves their production and the lifetime performance of their … R Behrendt, AJ Van Burgel, A Bailey, P Barber, M Curnow, DJ Gordon, ... Animal Production Science 51 (9), 805-812, 2011 | 73 | 2011 |
| INSPIIRED: quantification and visualization tools for analyzing integration site distributions CC Berry, C Nobles, E Six, Y Wu, N Malani, E Sherman, A Dryga, ... Molecular Therapy Methods & Clinical Development 4, 17-26, 2017 | 67 | 2017 |
| Associations of the vaginal microbiota with HIV infection, bacterial vaginosis, and demographic factors C Chehoud, DJ Stieh, AG Bailey, AL Laughlin, SA Allen, KL McCotter, ... Aids 31 (7), 895-904, 2017 | 51 | 2017 |
| Extracellular vesicles from Kaposi Sarcoma-associated herpesvirus lymphoma induce long-term endothelial cell reprogramming RP McNamara, PE Chugh, A Bailey, LM Costantini, Z Ma, R Bigi, ... PLoS pathogens 15 (2), e1007536, 2019 | 49 | 2019 |
| High-density amplicon sequencing identifies community spread and ongoing evolution of SARS-CoV-2 in the Southern United States RP McNamara, C Caro-Vegas, JT Landis, R Moorad, LJ Pluta, AB Eason, ... Cell reports 33 (5), 2020 | 45 | 2020 |
| Quantitation of HIV DNA integration: effects of differential integration site distributions on Alu-PCR assays T Brady, BJ Kelly, F Male, S Roth, A Bailey, N Malani, R Gijsbers, ... Journal of virological methods 189 (1), 53-57, 2013 | 38 | 2013 |
| Allometry and ecology of the bilaterian gut microbiome S Sherrill-Mix, K McCormick, A Lauder, A Bailey, L Zimmerman, Y Li, ... MBio 9 (2), 10.1128/mbio. 00319-18, 2018 | 37 | 2018 |
| Targeting mTOR with MLN0128 overcomes rapamycin and chemoresistant primary effusion lymphoma C Caro-Vegas, A Bailey, R Bigi, B Damania, DP Dittmer MBio 10 (1), 10.1128/mbio. 02871-18, 2019 | 28 | 2019 |
Frederic BushmanVerified email at mail.med.upenn.edu
