| Coordinated reduction of genes of oxidative metabolism in humans with insulin resistance and diabetes: Potential role of PGC1 and NRF1 ME Patti, AJ Butte, S Crunkhorn, K Cusi, R Berria, S Kashyap, Y Miyazaki, ... Proceedings of the National Academy of Sciences 100 (14), 8466-8471, 2003 | 2406 | 2003 |
| Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007 | 2246 | 2007 |
| High-quality draft assemblies of mammalian genomes from massively parallel sequence data S Gnerre, I MacCallum, D Przybylski, FJ Ribeiro, JN Burton, BJ Walker, ... Proceedings of the National Academy of Sciences 108 (4), 1513-1518, 2011 | 1887 | 2011 |
| Characterizing and measuring bias in sequence data MG Ross, C Russ, M Costello, A Hollinger, NJ Lennon, R Hegarty, ... Genome biology 14, 1-20, 2013 | 1032 | 2013 |
| Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation M Costello, TJ Pugh, TJ Fennell, C Stewart, L Lichtenstein, JC Meldrim, ... Nucleic acids research 41 (6), e67-e67, 2013 | 523 | 2013 |
| Characterization and remediation of sample index swaps by non-redundant dual indexing on massively parallel sequencing platforms M Costello, M Fleharty, J Abreu, Y Farjoun, S Ferriera, L Holmes, ... BMC genomics 19, 1-10, 2018 | 218 | 2018 |
| Defining the diverse spectrum of inversions, complex structural variation, and chromothripsis in the morbid human genome RL Collins, H Brand, CE Redin, C Hanscom, C Antolik, MR Stone, ... Genome biology 18, 1-21, 2017 | 197 | 2017 |
| Transcriptome variation in human tissues revealed by long-read sequencing DA Glinos, G Garborcauskas, P Hoffman, N Ehsan, L Jiang, A Gokden, ... Nature 608 (7922), 353-359, 2022 | 130 | 2022 |
| Targeted exon sequencing by in‐solution hybrid selection B Blumenstiel, K Cibulskis, S Fisher, M DeFelice, A Barry, T Fennell, ... Current Protocols in Human Genetics 66 (1), 18.4. 1-18.4. 24, 2010 | 88 | 2010 |
| High-throughput RNA isoform sequencing using programmed cDNA concatenation AM Al’Khafaji, JT Smith, KV Garimella, M Babadi, V Popic, ... Nature Biotechnology 42 (4), 582-586, 2024 | 36 | 2024 |
| High-throughput RNA isoform sequencing using programmable cDNA concatenation AM Al’Khafaji, JT Smith, KV Garimella, M Babadi, M Sade-Feldman, ... BioRxiv, 2021.10. 01.462818, 2021 | 30 | 2021 |
| Overexpression of BP1, a homeobox gene, is associated with resistance to all-trans retinoic acid in acute promyelocytic leukemia cells RT Awwad, K Do, H Stevenson, SW Fu, F Lo-Coco, M Costello, ... Annals of hematology 87, 195-203, 2008 | 24 | 2008 |
| Necdin and E2F4 are modulated by rosiglitazone therapy in diabetic human adipose and muscle tissue AB Goldfine, S Crunkhorn, M Costello, H Gami, EJ Landaker, M Niinobe, ... Diabetes 55 (3), 640-650, 2006 | 23 | 2006 |
| Familial thrombocytopenia due to a complex structural variant resulting in a WAC-ANKRD26 fusion transcript L Wahlster, JM Verboon, LS Ludwig, SC Black, W Luo, K Garg, RA Voit, ... Journal of Experimental Medicine 218 (6), e20210444, 2021 | 21 | 2021 |
| High throughput paired-end sequencing of large-insert clone libraries A Gnirke, R Nicol, L Williams, MT Costello, S Steelman US Patent App. 13/697,108, 2014 | 20 | 2014 |
| A single assay for human-specific quantification of less than 1 pg DNA and detection of the presence of PCR inhibitors in forensic samples MT Costello, JW Schumm International Congress Series 1288, 753-755, 2006 | 5 | 2006 |
| Webinar| Combating the" garbage-in-garbage-out" paradigm: The importance of library prep in next-gen sequencing workflows M Costello, MA Quail Science 353 (6306), 1449-1449, 2016 | | 2016 |
| Differential gene expression of key metabolic regulatory pathways in human liver as a function of diabetes and obesity ME Patti, J Yee, J Johnson, E Mun, M Costello, S Collins, AB Goldfine DIABETES 53, A363-A364, 2004 | | 2004 |
| Gene expression profiling in liver and muscle in low birth weight mice: Testing the'programming" hypothesis via cDNA microarrays JC Jimenez-Chillaron, R Saccone, M Costello, S Collins, ... DIABETES 51, A43-A43, 2002 | | 2002 |
| Normalizing UDI Library Construction for Sensitive Genomic Applications M Costello, A Kokkalis, D Bays, M Rahardja, J Smith, JT Leonard, G Rush, ... Plant and Animal Genome XXIX Conference (January 8-12, 2022), 0 | | |
