עקוב אחר
Anat Kreimer
Anat Kreimer
Assistant Professor - Center for Advanced Biotechnology and Medicine - Rutgers University
כתובת אימייל מאומתת בדומיין cabm.rutgers.edu - דף הבית
כותרת
צוטט על ידי
צוטט על ידי
שנה
The large-scale organization of the bacterial network of ecological co-occurrence interactions
S Freilich, A Kreimer, I Meilijson, U Gophna, R Sharan, E Ruppin
Nucleic acids research 38 (12), 3857-3868, 2010
2882010
The evolution of modularity in bacterial metabolic networks
A Kreimer, E Borenstein, U Gophna, E Ruppin
Proceedings of the National Academy of Sciences 105 (19), 6976-6981, 2008
2102008
Single-cell epigenomics reveals mechanisms of human cortical development
RS Ziffra, CN Kim, JM Ross, A Wilfert, TN Turner, M Haeussler, ...
Nature 598 (7879), 205-213, 2021
1572021
Use antibiotics in cell culture with caution: genome-wide identification of antibiotic-induced changes in gene expression and regulation
AH Ryu, WL Eckalbar, A Kreimer, N Yosef, N Ahituv
Scientific Reports 7, Article number: 7533, 2017
1192017
Metabolic-network-driven analysis of bacterial ecological strategies
S Freilich, A Kreimer, E Borenstein, N Yosef, R Sharan, U Gophna, ...
Genome biology 10, 1-8, 2009
1122009
Impact of pre-adapted HIV transmission
Nature medicine 22 (6), 606-613, 2016
106*2016
Identification and massively parallel characterization of regulatory elements driving neural induction
F Inoue, A Kreimer, T Ashuach, N Ahituv, N Yosef
Cell stem cell 25 (5), 713-727. e10, 2019
862019
NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation
R Levy, R Carr, A Kreimer, S Freilich, E Borenstein
BMC bioinformatics 16, 1-6, 2015
862015
lentiMPRA and MPRAflow for high-throughput functional characterization of gene regulatory elements
MG Gordon, F Inoue, B Martin, M Schubach, V Agarwal, S Whalen, ...
Nature protocols 15 (8), 2387-2412, 2020
712020
MPRAnalyze: statistical framework for massively parallel reporter assays
T Ashuach, DS Fischer, A Kreimer, N Ahituv, FJ Theis, N Yosef
Genome Biology 20 (183), 2019
632019
Predicting gene expression in massively parallel reporter assays: A comparative study
A Kreimer, H Zeng, MD Edwards, Y Guo, K Tian, S Shin, R Welch, ...
Human mutation 38 (9), 1240-1250, 2017
502017
NetCmpt: a network-based tool for calculating the metabolic competition between bacterial species
A Kreimer, A Doron-Faigenboim, E Borenstein, S Freilich
Bioinformatics 28 (16), 2195-2197, 2012
482012
Integration of multiple epigenomic marks improves prediction of variant impact in saturation mutagenesis reporter assay
D Shigaki, O Adato, AN Adhikari, S Dong, A Hawkins‐Hooker, F Inoue, ...
Human mutation 40 (9), 1280-1291, 2019
442019
Decoupling environment-dependent and independent genetic robustness across bacterial species
S Freilich, A Kreimer, E Borenstein, U Gophna, R Sharan, E Ruppin
PLoS computational biology 6 (2), e1000690, 2010
392010
Single cell epigenomic atlas of the developing human brain and organoids
RS Ziffra, CN Kim, A Wilfert, TN Turner, M Haeussler, AM Casella, ...
BioRxiv, 2019.12. 30.891549, 2019
322019
Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation
A Kreimer, T Ashuach, F Inoue, A Khodaverdian, C Deng, N Yosef, ...
Nature communications 13 (1), 1504, 2022
202022
Meta‐analysis of massively parallel reporter assays enables prediction of regulatory function across cell types
A Kreimer, Z Yan, N Ahituv, N Yosef
Human mutation 40 (9), 1299-1313, 2019
172019
Variants in exons and in transcription factors affect gene expression in trans
A Kreimer, I Pe'er
Genome biology 14, 1-13, 2013
172013
Inference of modules associated to eQTLs
A Kreimer, O Litvin, K Hao, C Molony, D Pe’er, I Pe'er
Nucleic acids research 40 (13), e98-e98, 2012
172012
Characterization of de novo promoter variants in autism spectrum disorder with massively parallel reporter assays
J Koesterich, JY An, F Inoue, A Sohota, N Ahituv, SJ Sanders, A Kreimer
International journal of molecular sciences 24 (4), 3509, 2023
62023
המערכת אינה יכולה לבצע את הפעולה כעת. נסה שוב מאוחר יותר.
מאמרים 1–20