Whole-genome analyses resolve early branches in the tree of life of modern birds ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... Science 346 (6215), 1320-1331, 2014 | 1992 | 2014 |
Evidence for GC-biased gene conversion as a driver of between-lineage differences in avian base composition CC Weber, B Boussau, J Romiguier, ED Jarvis, H Ellegren Genome Biology 15 (549), 2014 | 106 | 2014 |
Phylogenomic analyses data of the avian phylogenomics project ED Jarvis, S Mirarab, AJ Aberer, B Li, P Houde, C Li, SYW Ho, ... GigaScience 4 (1), 4, 2015 | 95 | 2015 |
GC-biased gene conversion links the recombination landscape and demography to genomic base composition CF Mugal, CC Weber, H Ellegren BioEssays 37 (12), 2015 | 80 | 2015 |
Early Mesozoic Coexistence of Amniotes and Hepadnaviridae A Suh, CC Weber, C Kehlmaier, EL Braun, RE Green, U Fritz, DA Ray, ... PLoS Genetics 10 (12), e1004559, 2014 | 70 | 2014 |
Kr/Kc but not dN/dS correlates positively with body mass in birds, raising implications for inferring lineage-specific selection CC Weber, B Nabholz, J Romiguier, H Ellegren Genome Biology 15 (542), 2014 | 67 | 2014 |
Support for multiple classes of local expression clusters in Drosophila melanogaster, but no evidence for gene order conservation CC Weber, LD Hurst Genome Biol 12 (3), R23, 2011 | 64 | 2011 |
ProtASR: An Evolutionary Framework for Ancestral Protein Reconstruction with Selection on Folding Stability M Arenas, CC Weber, DA Liberles, U Bastolla Systematic biology 66 (6), 1054-1064, 2017 | 45 | 2017 |
Why there is more to protein evolution than protein function: splicing, nucleosomes and dual-coding sequence T Warnecke, CC Weber, LD Hurst Biochem Soc Trans 37 (Pt 4), 756-761, 2009 | 43 | 2009 |
Late-replicating domains have higher divergence and diversity in Drosophila melanogaster CC Weber, CJ Pink, LD Hurst Molecular biology and evolution 29 (2), 873-882, 2012 | 39 | 2012 |
Physicochemical amino acid properties better describe substitution rates in large populations CC Weber, S Whelan Molecular Biology and Evolution, 2019 | 32 | 2019 |
Protein rates of evolution are predicted by double-strand break events, independent of crossing-over rates CC Weber, LD Hurst Genome Biology and Evolution 1, 340, 2009 | 20 | 2009 |
Protein evolution depends on multiple distinct population size parameters A Platt, CC Weber, DA Liberles BMC Evolutionary Biology 18 (17), https://doi.org/10.1186/s12862-017-1085-, 2018 | 13 | 2018 |
Protein Evolution Depends On Multiple Distinct Population Size Parameters A Platt, CC Weber, DA Liberles bioRxiv, 141499, 2017 | 13 | 2017 |
A new parameter‐rich structure‐aware mechanistic model for amino acid substitution during evolution PB Chi, D Kim, JK Lai, N Bykova, CC Weber, J Kubelka, DA Liberles Proteins: Structure, Function, and Bioinformatics 86 (2), 218-228, 2018 | 12 | 2018 |
Intronic AT Skew is a defendable proxy for germline transcription but does not predict crossing-over or protein evolution rates in Drosophila melanogaster CC Weber, LD Hurst Journal of molecular evolution 71 (5-6), 415-426, 2010 | 7 | 2010 |
Ambiguity Coding Allows Accurate Inference of Evolutionary Parameters from Alignments in an Aggregated State-Space CC Weber, U Perron, D Casey, Z Yang, N Goldman Systematic Biology, https://doi.org/10.1093/sysbio/syaa036, 2020 | 4 | 2020 |
Ambiguity coding allows accurate inference of evolutionary parameters from alignments in an aggregated state-space CC Weber, U Perron, D Casey, Z Yang, N Goldman https://www.biorxiv.org/content/10.1101/802603v1, 2019 | 4 | 2019 |
Disentangling Cobionts and Contamination in Long-Read Genomic Data using Sequence Composition CC Weber G3: Genes, Genomes, Genetics, https://doi.org/10.1093/g3journal/jkae18, 2024 | 1 | 2024 |
Disentangling Cobionts and Contamination in Long-Read Genomic Data using Sequence Composition CC Weber https://www.biorxiv.org/content/10.1101/2024.05.30.596622v1, 2024 | 1 | 2024 |