עקוב אחר
Xiaojing Wang
Xiaojing Wang
UT Health San Antonio
כתובת אימייל מאומתת בדומיין uthscsa.edu
כותרת
צוטט על ידי
צוטט על ידי
שנה
Proteogenomic characterization of human colon and rectal cancer
B Zhang, J Wang, X Wang, J Zhu, Q Liu, Z Shi, MC Chambers, ...
Nature 513 (7518), 382, 2014
13932014
Proteogenomic analysis of human colon cancer reveals new therapeutic opportunities
S Vasaikar, C Huang, X Wang, VA Petyuk, SR Savage, B Wen, Y Dou, ...
Cell 177 (4), 1035-1049. e19, 2019
5632019
Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789
W Wei, JH McCusker, RW Hyman, T Jones, Y Ning, Z Cao, Z Gu, D Bruno, ...
Proceedings of the National Academy of Sciences 104 (31), 12825-12830, 2007
3162007
Protein identification using customized protein sequence databases derived from RNA-Seq data
X Wang, RJC Slebos, D Wang, PJ Halvey, DL Tabb, DC Liebler, B Zhang
Journal of proteome research 11 (2), 1009-1017, 2012
1992012
SEPPA: a computational server for spatial epitope prediction of protein antigens
J Sun, D Wu, T Xu, X Wang, X Xu, L Tao, YX Li, ZW Cao
Nucleic acids research 37 (suppl_2), W612-W616, 2009
1882009
customProDB: an R package to generate customized protein databases from RNA-Seq data for proteomics search
X Wang, B Zhang
Bioinformatics 29 (24), 3235-3237, 2013
1672013
Methods, tools and current perspectives in proteogenomics
KV Ruggles, K Krug, X Wang, KR Clauser, J Wang, SH Payne, D Fenyö, ...
Molecular & Cellular Proteomics 16 (6), 959-981, 2017
1542017
Oncogenic KRAS and BRAF drive metabolic reprogramming in colorectal cancer
JE Hutton, X Wang, LJ Zimmerman, RJC Slebos, IA Trenary, JD Young, ...
Molecular & Cellular Proteomics 15 (9), 2924-2938, 2016
1072016
Nuclear Factor of Activated T-cell Activity Is Associated with Metastatic Capacity in Colon Cancer
MK Tripathi, NG Deane, J Zhu, H An, S Mima, X Wang, S Padmanabhan, ...
Cancer research 74 (23), 6947-6957, 2014
1062014
Detection of proteome diversity resulted from alternative splicing is limited by trypsin cleavage specificity
X Wang, SG Codreanu, B Wen, K Li, MC Chambers, DC Liebler, B Zhang
Molecular & Cellular Proteomics 17 (3), 422-430, 2018
842018
Leveraging the complementary nature of RNA‐Seq and shotgun proteomics data
X Wang, Q Liu, B Zhang
Proteomics 14 (23-24), 2676-2687, 2014
792014
PepQuery enables fast, accurate, and convenient proteomic validation of novel genomic alterations
B Wen, X Wang, B Zhang
Genome research 29 (3), 485-493, 2019
732019
Colorectal cancer cell line proteomes are representative of primary tumors and predict drug sensitivity
J Wang, D Mouradov, X Wang, RN Jorissen, MC Chambers, ...
Gastroenterology 153 (4), 1082-1095, 2017
692017
Activation of the endogenous renin-angiotensin-aldosterone system or aldosterone administration increases urinary exosomal sodium channel excretion
Y Qi, X Wang, KL Rose, WH MacDonald, B Zhang, KL Schey, JM Luther
Journal of the American Society of Nephrology 27 (2), 646-656, 2016
692016
PGA: an R/Bioconductor package for identification of novel peptides using a customized database derived from RNA-Seq
B Wen, S Xu, R Zhou, B Zhang, X Wang, X Liu, X Xu, S Liu
BMC bioinformatics 17, 1-6, 2016
572016
Revealing Missing Human Protein Isoforms Based on Ab Initio Prediction, RNA-seq and Proteomics
Z Hu, HS Scott, G Qin, G Zheng, X Chu, L Xie, DL Adelson, BE Oftedal, ...
Scientific reports 5 (1), 10940, 2015
522015
Proteogenomic analysis reveals unanticipated adaptations of colorectal tumor cells to deficiencies in DNA mismatch repair
PJ Halvey, X Wang, J Wang, AA Bhat, P Dhawan, M Li, B Zhang, ...
Cancer research 74 (1), 387-397, 2014
522014
Conserved genes in a path from commensalism to pathogenicity: comparative phylogenetic profiles of Staphylococcus epidermidis RP62A and ATCC12228
W Wei, ZW Cao, YL Zhu, XJ Wang, GH Ding, H Xu, PL Jia, D Qu, ...
Bmc Genomics 7, 1-12, 2006
482006
Integrated analysis of telomerase enzymatic activity unravels an association with cancer stemness and proliferation
N Noureen, S Wu, Y Lv, J Yang, WK Alfred Yung, J Gelfond, X Wang, ...
Nature communications 12 (1), 139, 2021
452021
CanProVar 2.0: an updated database of human cancer proteome variation
M Zhang, B Wang, J Xu, X Wang, L Xie, B Zhang, Y Li, J Li
Journal of proteome research 16 (2), 421-432, 2017
422017
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מאמרים 1–20