| Nuclear envelope dystrophies show a transcriptional fingerprint suggesting disruption of Rb–MyoD pathways in muscle regeneration M Bakay, Z Wang, G Melcon, L Schiltz, J Xuan, P Zhao, V Sartorelli, J Seo, ... Brain 129 (4), 996-1013, 2006 | 296 | 2006 |
| A chaperome subnetwork safeguards proteostasis in aging and neurodegenerative disease M Brehme, C Voisine, T Rolland, S Wachi, J Soper, Y Zhu, K Orton, ... Cell Reports 9 (3), 1135-1150, 2014 | 287 | 2014 |
| TCGA-Assembler: Open-Source Software for Retrieving and Processing TCGA Data Y Zhu, P Qiu, Y Ji Nature Methods 11 (6), 599–600, 2014 | 274 | 2014 |
| MR imaging radiomics signatures for predicting the risk of breast cancer recurrence as given by research versions of MammaPrint, Oncotype DX, and PAM50 gene assays H Li, Y Zhu, ES Burnside, K Drukker, KA Hoadley, C Fan, SD Conzen, ... Radiology 281 (2), 382-391, 2016 | 246 | 2016 |
| Quantitative MRI radiomics in the prediction of molecular classifications of breast cancer subtypes in the TCGA/TCIA data set H Li, Y Zhu, ES Burnside, E Huang, K Drukker, KA Hoadley, C Fan, ... NPJ breast cancer 2 (1), 1-10, 2016 | 160 | 2016 |
| Deciphering genomic underpinnings of quantitative MRI-based radiomic phenotypes of invasive breast carcinoma Y Zhu, H Li, W Guo, K Drukker, L Lan, ML Giger, Y Ji Scientific reports 5, 17787, 2015 | 96 | 2015 |
| Initialization enhancer for non-negative matrix factorization Z Zheng, J Yang, Y Zhu Engineering Applications of Artificial Intelligence 20 (1), 101-110, 2007 | 84 | 2007 |
| TCGA-assembler 2: software pipeline for retrieval and processing of TCGA/CPTAC data L Wei, Z Jin, S Yang, Y Xu, Y Zhu, Y Ji Bioinformatics 34 (9), 1615-1617, 2018 | 72 | 2018 |
| Using computer‐extracted image phenotypes from tumors on breast magnetic resonance imaging to predict breast cancer pathologic stage ES Burnside, K Drukker, H Li, E Bonaccio, M Zuley, M Ganott, JM Net, ... Cancer 122 (5), 748-757, 2016 | 47 | 2016 |
| A face detection and recognition system in color image series J Yang, X Ling, Y Zhu, Z Zheng Mathematics and Computers in Simulation 77 (5-6), 531-539, 2008 | 41 | 2008 |
| Zodiac: a comprehensive depiction of genetic interactions in cancer by integrating TCGA data Y Zhu, Y Xu, DL Helseth, K Gulukota, S Yang, LL Pesce, R Mitra, P Müller, ... JNCI: Journal of the National Cancer Institute 107 (8), 2015 | 30 | 2015 |
| A Nonparametric Bayesian Model for Local Clustering With Application to Proteomics J Lee, P Müller, Y Zhu, Y Ji Journal of the American Statistical Association 108 (503), 775-788, 2013 | 27 | 2013 |
| VISDA: an open-source caBIG™ analytical tool for data clustering and beyond J Wang, H Li, Y Zhu, M Yousef, M Nebozhyn, M Showe, L Showe, J Xuan, ... Bioinformatics 23 (15), 2024-2027, 2007 | 24 | 2007 |
| caBIG™ VISDA: Modeling, visualization, and discovery for cluster analysis of genomic data Y Zhu, H Li, DJ Miller, Z Wang, J Xuan, R Clarke, EP Hoffman, Y Wang BMC bioinformatics 9 (1), 383, 2008 | 17 | 2008 |
| Heterogeneous reciprocal graphical models Y Ni, P Müller, Y Zhu, Y Ji Biometrics 74 (2), 606-615, 2018 | 16 | 2018 |
| Radiogenomics of breast cancer using dynamic contrast enhanced MRI and gene expression profiling AC Yeh, H Li, Y Zhu, J Zhang, G Khramtsova, K Drukker, A Edwards, ... Cancer Imaging 19 (1), 48, 2019 | 15 | 2019 |
| Ultra-fast local-haplotype variant calling using paired-end DNA-sequencing data reveals somatic mosaicism in tumor and normal blood samples S Sengupta, K Gulukota, Y Zhu, C Ober, K Naughton, ... Nucleic acids research 44 (3), e25-e25, 2016 | 11 | 2016 |
| Face detection and recognition using colour sequential images Z Zhonglong, J Yang, Y Zhu Journal of Research and Practice in Information Technology 38 (2), 135, 2006 | 11 | 2006 |
| Imaging-genomic study of head and neck squamous cell carcinoma: Associations between radiomic phenotypes and genomic mechanisms via integration of The Cancer Genome Atlas and … Y Zhu, ASR Mohamed, SY Lai, S Yang, A Kanwar, L Wei, M Kamal, ... JCO clinical cancer informatics 3, 1-9, 2019 | 9 | 2019 |
| An Oncolytic Adenovirus Targeting Transforming Growth Factor β Inhibits Protumorigenic Signals and Produces Immune Activation: A Novel Approach to Enhance Anti-PD-1 and Anti … Y Yang, W Xu, D Peng, H Wang, X Zhang, H Wang, F Xiao, Y Zhu, Y Ji, ... Human gene therapy 30 (9), 1117-1132, 2019 | 8 | 2019 |
