עקוב אחר
Rodrigo Galindo-Murillo
Rodrigo Galindo-Murillo
Principal scientist - IONIS Pharmaceuticals, Inc
כתובת אימייל מאומתת בדומיין ionisph.com
כותרת
צוטט על ידי
צוטט על ידי
שנה
Refinement of the sugar–phosphate backbone torsion beta for AMBER force fields improves the description of Z-and B-DNA
M Zgarbová, J Sponer, M Otyepka, TE Cheatham III, R Galindo-Murillo, ...
Journal of chemical theory and computation 11 (12), 5723-5736, 2015
4612015
Assessing the current state of amber force field modifications for DNA
R Galindo-Murillo, JC Robertson, M Zgarbova, J Sponer, M Otyepka, ...
Journal of chemical theory and computation 12 (8), 4114-4127, 2016
3992016
Convergence and reproducibility in molecular dynamics simulations of the DNA duplex d (GCACGAACGAACGAACGC)
R Galindo-Murillo, DR Roe, TE Cheatham III
Biochimica et Biophysica Acta (BBA)-General Subjects 1850 (5), 1041-1058, 2015
1692015
Intercalation processes of copper complexes in DNA
R Galindo-Murillo, JC García-Ramos, L Ruiz-Azuara, TE Cheatham, ...
Nucleic acids research 43 (11), 5364-5376, 2015
1672015
On the absence of intrahelical DNA dynamics on the μs to ms timescale
R Galindo-Murillo, DR Roe, TE Cheatham III
Nature communications 5 (1), 5152, 2014
862014
Metal-based drug-DNA interactions
JC García-Ramos, R Galindo-Murillo, F Cortés-Guzmán, L Ruiz-Azuara
Journal of the Mexican Chemical Society 57 (3), 245-259, 2013
832013
Ethidium bromide interactions with DNA: an exploration of a classic DNA–ligand complex with unbiased molecular dynamics simulations
R Galindo-Murillo, TE Cheatham III
Nucleic Acids Research 49 (7), 3735-3747, 2021
662021
Molecular recognition between DNA and a copper-based anticancer complex
R Galindo-Murillo, L Ruíz-Azuara, R Moreno-Esparza, F Cortés-Guzmán
Physical Chemistry Chemical Physics 14 (44), 15539-15546, 2012
632012
Defining a conformational ensemble that directs activation of PPARγ
IM Chrisman, MD Nemetchek, IMS De Vera, J Shang, Z Heidari, Y Long, ...
Nature communications 9 (1), 1794, 2018
622018
π-Stacking between Casiopeinas® and DNA bases
R Galindo-Murillo, J Hernandez-Lima, M González-Rendón, ...
Physical Chemistry Chemical Physics 13 (32), 14510-14515, 2011
492011
Transitions of double-stranded DNA between the A-and B-forms
JT Waters, XJ Lu, R Galindo-Murillo, JC Gumbart, HD Kim, ...
The Journal of Physical Chemistry B 120 (33), 8449-8456, 2016
482016
Whole genome gene expression analysis reveals casiopeina-induced apoptosis pathways
AI Valencia-Cruz, LI Uribe-Figueroa, R Galindo-Murillo, K Baca-Lopez, ...
PloS one 8 (1), e54664, 2013
442013
The π‐Back‐Bonding Modulation and Its Impact in the Electronic Properties of CuII Antineoplastic Compounds: An Experimental and Theoretical Study
JC García‐Ramos, R Galindo‐Murillo, A Tovar‐Tovar, AL Alonso‐Saenz, ...
Chemistry–A European Journal 20 (42), 13730-13741, 2014
432014
Oxazinin A, a pseudodimeric natural product of mixed biosynthetic origin from a filamentous fungus
Z Lin, M Koch, MH Abdel Aziz, R Galindo-Murillo, MD Tianero, ...
Organic letters 16 (18), 4774-4777, 2014
392014
In silico design of monomolecular drug carriers for the tyrosine kinase inhibitor drug imatinib based on calix-and thiacalix [n] arene host molecules: a DFT and molecular …
R Galindo-Murillo, ME Sandoval-Salinas, J Barroso-Flores
Journal of Chemical Theory and Computation 10 (2), 825-834, 2014
312014
Calix [n] arene-based drug carriers: a DFT study of their electronic interactions with a chemotherapeutic agent used against leukemia
R Galindo-Murillo, A Olmedo-Romero, E Cruz-Flores, PM Petrar, ...
Computational and Theoretical Chemistry 1035, 84-91, 2014
302014
Dissociative reactions of benzonorbornadienes with tetrazines: scope of leaving groups and mechanistic insights
M Xu, R Galindo-Murillo, TE Cheatham, RM Franzini
Organic & Biomolecular Chemistry 15 (46), 9855-9865, 2017
282017
Molecular modeling of nucleic acid structure
R Galindo‐Murillo, C Bergonzo, TE Cheatham III
Current protocols in nucleic acid chemistry 54 (1), 7.5. 1-7.5. 13, 2013
22*2013
Computational DNA binding studies of (–)-epigallocatechin-3-gallate
R Galindo-Murillo, TE Cheatham III
Journal of Biomolecular Structure and Dynamics 36 (13), 3311-3323, 2018
212018
Using wavelet analysis to assist in identification of significant events in molecular dynamics simulations
Z Heidari, DR Roe, R Galindo-Murillo, JB Ghasemi, TE Cheatham III
Journal of chemical information and modeling 56 (7), 1282-1291, 2016
212016
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